Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:53141206-53351213

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Abca1 4 53030787 to 53159895 129108 - protein coding gene ATP-binding cassette, sub-family A (ABC1), member 1
Tssr1175 4 53142629 to 53142639 10 - TSS region transcription start site region 1175
Tssr41755 4 53142739 to 53142755 16 - TSS region transcription start site region 41755
Tssr41756 4 53142756 to 53142769 13 - TSS region transcription start site region 41756
Tssr41757 4 53142778 to 53142789 11 - TSS region transcription start site region 41757
Tssr41758 4 53144024 to 53144037 13 - TSS region transcription start site region 41758
Tssr41759 4 53144060 to 53144088 28 - TSS region transcription start site region 41759
Tssr41760 4 53144091 to 53144111 20 - TSS region transcription start site region 41760
Tssr41761 4 53144225 to 53144241 16 - TSS region transcription start site region 41761
Tssr41762 4 53144253 to 53144264 11 - TSS region transcription start site region 41762
Tssr41763 4 53149529 to 53149540 11 - TSS region transcription start site region 41763
Tssr41764 4 53153716 to 53153743 27 - TSS region transcription start site region 41764
Tssr41765 4 53157722 to 53157726 4 - TSS region transcription start site region 41765
Tssr41766 4 53158426 to 53158429 3 - TSS region transcription start site region 41766
Cpgi14298 4 53159290 to 53160220 930 CpG island CpG island 14298
Tssr41767 4 53159885 to 53159900 15 - TSS region transcription start site region 41767
Cpgi14299 4 53165394 to 53166209 815 CpG island CpG island 14299
4930412L05Rik 4 53205066 to 53217857 12791 - lncRNA gene RIKEN cDNA 4930412L05 gene
Cpgi14300 4 53217493 to 53218050 557 CpG island CpG island 14300
Tssr37289 4 53227338 to 53227378 40 + TSS region transcription start site region 37289
Tssr37290 4 53246174 to 53246182 8 + TSS region transcription start site region 37290
Tssr37291 4 53246184 to 53246202 18 + TSS region transcription start site region 37291
4930522O17Rik 4 53246196 to 53251115 4919 + antisense lncRNA gene RIKEN cDNA 4930522O17 gene
Tssr37292 4 53246206 to 53246213 7 + TSS region transcription start site region 37292
Tssr37293 4 53246216 to 53246227 11 + TSS region transcription start site region 37293
AI427809 4 53261356 to 53270232 8876 - lincRNA gene expressed sequence AI427809
Gm12495 4 53308226 to 53308672 446 + pseudogene predicted gene 12495
D4Mit163 4 53312081 to 53312216 135 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 163
Tssr41768 4 53339817 to 53339844 27 - TSS region transcription start site region 41768
Tssr37294 4 53340117 to 53340128 11 + TSS region transcription start site region 37294
Tssr37295 4 53341415 to 53341423 8 + TSS region transcription start site region 37295