Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:52620399-53031358

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr41709 4 52814517 to 52814567 50 - TSS region transcription start site region 41709
Tssr37282 4 52814594 to 52814629 35 + TSS region transcription start site region 37282
4930552N02Rik 4 52814604 to 52828269 13665 + lncRNA gene RIKEN cDNA 4930552N02 gene
Gm12482 4 52821488 to 52822117 629 + pseudogene predicted gene 12482
Olfr275 4 52825399 to 52826358 959 + protein coding gene olfactory receptor 275
D4Nds6 4 52838743 to 52838888 145 DNA segment DNA segment, Chr 4, Nuffield Department of Surgery 6
Olfr274-ps1 4 52842198 to 52843026 828 - pseudogene olfactory receptor 274, pseudogene 1
Olfr273 4 52855558 to 52856511 953 - protein coding gene olfactory receptor 273
Hdlq10 4 52859707 to 52859853 146 QTL HDL QTL 10
D4Mit110 4 52859707 to 52859853 146 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 110
Gm47786 4 52878008 to 52878702 694 + pseudogene predicted gene, 47786
Cpgi14295 4 52880954 to 52881131 177 CpG island CpG island 14295
Cct3-ps1 4 52900599 to 52902683 2084 + pseudogene chaperonin containing Tcp1, subunit 3 (gamma) pseudogene 1
Tssr37283 4 52900608 to 52900620 12 + TSS region transcription start site region 37283
Olfr272 4 52910833 to 52911792 959 - protein coding gene olfactory receptor 272
Olfr271-ps1 4 52935430 to 52936381 951 - polymorphic pseudogene olfactory receptor 271, pseudogene 1
Gm33479 4 52944344 to 52958773 14429 - lncRNA gene predicted gene, 33479
Olfr270 4 52970629 to 52971567 938 + protein coding gene olfactory receptor 270
Cpgi14296 4 52989216 to 52989475 259 CpG island CpG island 14296
Tssr37284 4 52989271 to 52989308 37 + TSS region transcription start site region 37284
Nipsnap3a 4 52989284 to 53000854 11570 + protein coding gene nipsnap homolog 3A
Cpgi14297 4 53011591 to 53012596 1005 CpG island CpG island 14297
Nipsnap3b 4 53011880 to 53022060 10180 + protein coding gene nipsnap homolog 3B
Tssr37285 4 53011894 to 53011907 13 + TSS region transcription start site region 37285
Tssr37286 4 53011916 to 53011978 62 + TSS region transcription start site region 37286
Tssr41710 4 53029119 to 53029126 7 - TSS region transcription start site region 41710
Abca1 4 53030787 to 53159895 129108 - protein coding gene ATP-binding cassette, sub-family A (ABC1), member 1