MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:52422204-52792215

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Smc2os	4	52430284 to 52438964	8680	-	antisense lncRNA gene	structural maintenance of chromosomes 2, opposite strand
Cpgi14294	4	52438884 to 52439658	774		CpG island	CpG island 14294
Tssr37274	4	52439224 to 52439232	8	+	TSS region	transcription start site region 37274
Tssr37275	4	52439235 to 52439287	52	+	TSS region	transcription start site region 37275
Smc2	4	52439243 to 52488260	49017	+	protein coding gene	structural maintenance of chromosomes 2
Tssr37276	4	52440108 to 52440113	5	+	TSS region	transcription start site region 37276
Tmc4-ps	4	52443915 to 52444172	257	-	pseudogene	Tmc4 retrotransposed pseudogene
Tssr41708	4	52445415 to 52445440	25	-	TSS region	transcription start site region 41708
Tssr37277	4	52450856 to 52450866	10	+	TSS region	transcription start site region 37277
Tssr1174	4	52462964 to 52462977	13	+	TSS region	transcription start site region 1174
Tssr37278	4	52465928 to 52465941	13	+	TSS region	transcription start site region 37278
Vma21-ps	4	52496939 to 52497244	305	-	pseudogene	VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), pseudogene
Tssr37279	4	52596270 to 52596276	6	+	TSS region	transcription start site region 37279
Toporsl	4	52596274 to 52612424	16150	+	protein coding gene	topoisomerase I binding, arginine/serine-rich like
Tssr37280	4	52596285 to 52596299	14	+	TSS region	transcription start site region 37280
Tssr37281	4	52607204 to 52607215	11	+	TSS region	transcription start site region 37281
Gm33435	4	52615448 to 52617881	2433	-	lncRNA gene	predicted gene, 33435