Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:5239009-6206101

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D4Mit316 4 5263968 to 5264079 111 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 316
Tssr36374 4 5472440 to 5472445 5 + TSS region transcription start site region 36374
Tssr36375 4 5536821 to 5536825 4 + TSS region transcription start site region 36375
Gm11782 4 5545238 to 5551223 5985 - lincRNA gene predicted gene 11782
Gm11781 4 5602924 to 5603395 471 - pseudogene predicted gene 11781
Tssr36376 4 5611846 to 5611856 10 + TSS region transcription start site region 36376
4930423M02Rik 4 5632328 to 5642284 9956 + lincRNA gene RIKEN cDNA 4930423M02 gene
Tssr36377 4 5632331 to 5632340 9 + TSS region transcription start site region 36377
Cpgi13998 4 5643825 to 5644860 1035 CpG island CpG island 13998
Fam110b 4 5644079 to 5801101 157022 + protein coding gene family with sequence similarity 110, member B
Tssr36378 4 5644084 to 5644129 45 + TSS region transcription start site region 36378
Tssr36379 4 5644133 to 5644211 78 + TSS region transcription start site region 36379
Tssr36380 4 5644216 to 5644240 24 + TSS region transcription start site region 36380
Tssr36381 4 5644268 to 5644279 11 + TSS region transcription start site region 36381
Gm24337 4 5687677 to 5687802 125 - snoRNA gene predicted gene, 24337
Tssr36382 4 5724304 to 5724357 53 + TSS region transcription start site region 36382
Tssr36383 4 5786673 to 5786675 2 + TSS region transcription start site region 36383
Cpgi13999 4 5798251 to 5799067 816 CpG island CpG island 13999
Gm11796 4 5854516 to 5855487 971 - pseudogene predicted gene 11796
Sm1 4 5955486 to 5955614 128 QTL susceptibility to Schistosoma mansoni infection 1
D4Mit103 4 5955486 to 5955614 128 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 103
Gm18158 4 6025065 to 6025846 781 - pseudogene predicted gene, 18158
Gm11797 4 6069901 to 6070627 726 + pseudogene predicted gene 11797
Cpgi14000 4 6190845 to 6191472 627 CpG island CpG island 14000
Tssr36384 4 6191093 to 6191122 29 + TSS region transcription start site region 36384
Ubxn2b 4 6191105 to 6219788 28683 + protein coding gene UBX domain protein 2B