MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:51712168-52442467

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm24943	4	51799920 to 51800352	432	+	ribozyme gene	predicted gene, 24943
Gm22042	4	51812483 to 51812647	164	-	snRNA gene	predicted gene, 22042
Tssr1173	4	51812643 to 51812647	4	-	TSS region	transcription start site region 1173
Gm46854	4	51876647 to 51877430	783	+	lncRNA gene	predicted gene, 46854
Gm12461	4	51892893 to 51894131	1238	+	pseudogene	predicted gene 12461
C630028M04Rik	4	51968094 to 52051110	83016	-	lincRNA gene	RIKEN cDNA C630028M04 gene
Gm12465	4	52077168 to 52077467	299	-	pseudogene	predicted gene 12465
D4Mit88	4	52154171 to 52154335	164		DNA segment	DNA segment, Chr 4, Massachusetts Institute of Technology 88
Tssr41707	4	52197211 to 52197217	6	-	TSS region	transcription start site region 41707
Tssr37273	4	52240860 to 52240872	12	+	TSS region	transcription start site region 37273
Gm12466	4	52240903 to 52241522	619	+	pseudogene	predicted gene 12466
Gm12467	4	52241712 to 52242456	744	+	pseudogene	predicted gene 12467
Gm12475	4	52360826 to 52362211	1385	-	pseudogene	predicted gene 12475
Smc2os	4	52430284 to 52438964	8680	-	antisense lncRNA gene	structural maintenance of chromosomes 2, opposite strand
Cpgi14294	4	52438884 to 52439658	774		CpG island	CpG island 14294
Tssr37274	4	52439224 to 52439232	8	+	TSS region	transcription start site region 37274
Tssr37275	4	52439235 to 52439287	52	+	TSS region	transcription start site region 37275
Smc2	4	52439243 to 52488260	49017	+	protein coding gene	structural maintenance of chromosomes 2
Tssr37276	4	52440108 to 52440113	5	+	TSS region	transcription start site region 37276