Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:51572168-52582467

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm23043 4 51655767 to 51655875 108 + snoRNA gene predicted gene, 23043
Tssr37272 4 51659191 to 51659193 2 + TSS region transcription start site region 37272
Gm24943 4 51799920 to 51800352 432 + ribozyme gene predicted gene, 24943
Gm22042 4 51812483 to 51812647 164 - snRNA gene predicted gene, 22042
Tssr1173 4 51812643 to 51812647 4 - TSS region transcription start site region 1173
Gm46854 4 51876647 to 51877430 783 + lncRNA gene predicted gene, 46854
Gm12461 4 51892893 to 51894131 1238 + pseudogene predicted gene 12461
C630028M04Rik 4 51968094 to 52051110 83016 - lincRNA gene RIKEN cDNA C630028M04 gene
Gm12465 4 52077168 to 52077467 299 - pseudogene predicted gene 12465
D4Mit88 4 52154171 to 52154335 164 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 88
Tssr41707 4 52197211 to 52197217 6 - TSS region transcription start site region 41707
Tssr37273 4 52240860 to 52240872 12 + TSS region transcription start site region 37273
Gm12466 4 52240903 to 52241522 619 + pseudogene predicted gene 12466
Gm12467 4 52241712 to 52242456 744 + pseudogene predicted gene 12467
Gm12475 4 52360826 to 52362211 1385 - pseudogene predicted gene 12475
Smc2os 4 52430284 to 52438964 8680 - antisense lncRNA gene structural maintenance of chromosomes 2, opposite strand
Cpgi14294 4 52438884 to 52439658 774 CpG island CpG island 14294
Tssr37274 4 52439224 to 52439232 8 + TSS region transcription start site region 37274
Tssr37275 4 52439235 to 52439287 52 + TSS region transcription start site region 37275
Smc2 4 52439243 to 52488260 49017 + protein coding gene structural maintenance of chromosomes 2
Tssr37276 4 52440108 to 52440113 5 + TSS region transcription start site region 37276
Tmc4-ps 4 52443915 to 52444172 257 - pseudogene Tmc4 retrotransposed pseudogene
Tssr41708 4 52445415 to 52445440 25 - TSS region transcription start site region 41708
Tssr37277 4 52450856 to 52450866 10 + TSS region transcription start site region 37277
Tssr1174 4 52462964 to 52462977 13 + TSS region transcription start site region 1174
Tssr37278 4 52465928 to 52465941 13 + TSS region transcription start site region 37278
Vma21-ps 4 52496939 to 52497244 305 - pseudogene VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), pseudogene