Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:49655909-50446403

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf20 4 49632006 to 49656887 24881 + protein coding gene ring finger protein 20
Grin3a 4 49661611 to 49845744 184133 - protein coding gene glutamate receptor ionotropic, NMDA3A
Ppp3r2 4 49678747 to 49681983 3236 - protein coding gene protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II)
Cpgi14292 4 49681631 to 49682028 397 CpG island CpG island 14292
Tssr41700 4 49681956 to 49682038 82 - TSS region transcription start site region 41700
Gm42286 4 49682004 to 49692792 10788 + lncRNA gene predicted gene, 42286
Tssr41701 4 49682377 to 49682385 8 - TSS region transcription start site region 41701
Gm12459 4 49746731 to 49747246 515 - pseudogene predicted gene 12459
Tssr41702 4 49747259 to 49747271 12 - TSS region transcription start site region 41702
Cpgi14293 4 49844295 to 49846056 1761 CpG island CpG island 14293
Tssr41703 4 49844885 to 49844887 2 - TSS region transcription start site region 41703
Tssr41704 4 49845730 to 49845774 44 - TSS region transcription start site region 41704
Tssr41705 4 49845853 to 49845863 10 - TSS region transcription start site region 41705
Gm12458 4 50050909 to 50051403 494 - pseudogene predicted gene 12458
Tssr37267 4 50177582 to 50177587 5 + TSS region transcription start site region 37267
Gm25485 4 50286746 to 50286877 131 + snoRNA gene predicted gene, 25485