Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:49641611-49865744

14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rnf20	4	49632006 to 49656887	24881	+	protein coding gene	ring finger protein 20
Tssr37266	4	49650092 to 49650110	18	+	TSS region	transcription start site region 37266
Grin3a	4	49661611 to 49845744	184133	-	protein coding gene	glutamate receptor ionotropic, NMDA3A
Ppp3r2	4	49678747 to 49681983	3236	-	protein coding gene	protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II)
Cpgi14292	4	49681631 to 49682028	397		CpG island	CpG island 14292
Tssr41700	4	49681956 to 49682038	82	-	TSS region	transcription start site region 41700
Gm42286	4	49682004 to 49692792	10788	+	lncRNA gene	predicted gene, 42286
Tssr41701	4	49682377 to 49682385	8	-	TSS region	transcription start site region 41701
Gm12459	4	49746731 to 49747246	515	-	pseudogene	predicted gene 12459
Tssr41702	4	49747259 to 49747271	12	-	TSS region	transcription start site region 41702
Cpgi14293	4	49844295 to 49846056	1761		CpG island	CpG island 14293
Tssr41703	4	49844885 to 49844887	2	-	TSS region	transcription start site region 41703
Tssr41704	4	49845730 to 49845774	44	-	TSS region	transcription start site region 41704
Tssr41705	4	49845853 to 49845863	10	-	TSS region	transcription start site region 41705