Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:48602978-49343315

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmeff1 4 48585174 to 48663131 77957 + protein coding gene transmembrane protein with EGF-like and two follistatin-like domains 1
Tssr37243 4 48610441 to 48610448 7 + TSS region transcription start site region 37243
Tssr37244 4 48610488 to 48610507 19 + TSS region transcription start site region 37244
Tssr37245 4 48615530 to 48615535 5 + TSS region transcription start site region 37245
Cpgi14287 4 48617186 to 48617452 266 CpG island CpG island 14287
Tssr37246 4 48618744 to 48618769 25 + TSS region transcription start site region 37246
Tssr37247 4 48618927 to 48618933 6 + TSS region transcription start site region 37247
Tssr37248 4 48636895 to 48636908 13 + TSS region transcription start site region 37248
Tssr37249 4 48662382 to 48662408 26 + TSS region transcription start site region 37249
Tssr37250 4 48663502 to 48663525 23 + TSS region transcription start site region 37250
Cavin4 4 48663514 to 48673492 9978 + protein coding gene caveolae associated 4
Tssr37251 4 48663546 to 48663563 17 + TSS region transcription start site region 37251
Gm12439 4 48675156 to 48675520 364 + pseudogene predicted gene 12439
Gm12438 4 48745515 to 48745850 335 - pseudogene predicted gene 12438
Gm24573 4 48762851 to 48762962 111 - rRNA gene predicted gene, 24573
D4Mit273 4 48782300 to 48782424 124 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 273
Gm23746 4 48896499 to 48896623 124 + snoRNA gene predicted gene, 23746
Tssr37252 4 48898558 to 48898565 7 + TSS region transcription start site region 37252
Gm12436 4 48898593 to 48963237 64644 + lincRNA gene predicted gene 12436
4933437F24Rik 4 48970694 to 48972164 1470 unclassified gene RIKEN cDNA 4933437F24 gene
Gm12442 4 48972978 to 48973315 337 + pseudogene predicted gene 12442
Cpgi14288 4 49058784 to 49060202 1418 CpG island CpG island 14288
Tssr37253 4 49059231 to 49059247 16 + TSS region transcription start site region 37253
Tssr37254 4 49059256 to 49059330 74 + TSS region transcription start site region 37254
Tssr37255 4 49059335 to 49059347 12 + TSS region transcription start site region 37255
Tssr37256 4 49059439 to 49059465 26 + TSS region transcription start site region 37256
Plppr1 4 49059462 to 49340261 280799 + protein coding gene phospholipid phosphatase related 1
Tssr37257 4 49059466 to 49059550 84 + TSS region transcription start site region 37257
Gm32657 4 49227442 to 49244719 17277 - lncRNA gene predicted gene, 32657
Gm22685 4 49289298 to 49289403 105 + snRNA gene predicted gene, 22685
D4Mit112 4 49304001 to 49304124 123 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 112
Gm12453 4 49342248 to 49342578 330 + pseudogene predicted gene 12453