Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:48144215-48545230

Filter by:
29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stx17 4 48124915 to 48186507 61592 + protein coding gene syntaxin 17
Erp44 4 48193323 to 48279558 86235 - protein coding gene endoplasmic reticulum protein 44
Mir1958 4 48213119 to 48213215 96 - miRNA gene microRNA 1958
Cpgi14283 4 48279095 to 48280127 1032 CpG island CpG island 14283
Tssr41637 4 48279502 to 48279515 13 - TSS region transcription start site region 41637
Tssr41638 4 48279544 to 48279613 69 - TSS region transcription start site region 41638
Invs 4 48279760 to 48431954 152194 + protein coding gene inversin
Tssr37227 4 48279794 to 48279852 58 + TSS region transcription start site region 37227
Tssr1170 4 48279857 to 48279881 24 + TSS region transcription start site region 1170
Gm12435 4 48344215 to 48345230 1015 - pseudogene predicted gene 12435
C030004N09Rik 4 48427728 to 48429230 1502 unclassified gene RIKEN cDNA C030004N09 gene
Tex10 4 48430858 to 48473459 42601 - protein coding gene testis expressed gene 10
Tssr41639 4 48435004 to 48435017 13 - TSS region transcription start site region 41639
Tssr41640 4 48435099 to 48435108 9 - TSS region transcription start site region 41640
Tssr41641 4 48442128 to 48442131 3 - TSS region transcription start site region 41641
Tssr41642 4 48468791 to 48468819 28 - TSS region transcription start site region 41642
Cpgi14284 4 48472788 to 48473684 896 CpG island CpG island 14284
Tssr41643 4 48473339 to 48473356 17 - TSS region transcription start site region 41643
Tssr41644 4 48473382 to 48473401 19 - TSS region transcription start site region 41644
Tssr41645 4 48473403 to 48473457 54 - TSS region transcription start site region 41645
Cpgi14285 4 48539838 to 48541148 1310 CpG island CpG island 14285
Tssr37228 4 48539909 to 48539924 15 + TSS region transcription start site region 37228
Msantd3 4 48539935 to 48561919 21984 + protein coding gene Myb/SANT-like DNA-binding domain containing 3
Tssr37229 4 48540067 to 48540086 19 + TSS region transcription start site region 37229
Tssr37230 4 48540118 to 48540138 20 + TSS region transcription start site region 37230
Tssr37231 4 48540152 to 48540167 15 + TSS region transcription start site region 37231
Tssr37232 4 48540347 to 48540368 21 + TSS region transcription start site region 37232
Tssr37233 4 48540381 to 48540411 30 + TSS region transcription start site region 37233
Tssr37234 4 48540419 to 48540502 83 + TSS region transcription start site region 37234