Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:47403337-47783463

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tgfbr1 4 47353222 to 47414926 61704 + protein coding gene transforming growth factor, beta receptor I
Tssr37169 4 47409822 to 47409826 4 + TSS region transcription start site region 37169
Tssr37170 4 47412764 to 47412800 36 + TSS region transcription start site region 37170
Tssr37171 4 47413790 to 47413803 13 + TSS region transcription start site region 37171
Cpgi14275 4 47437596 to 47438271 675 CpG island CpG island 14275
Gm12430 4 47453632 to 47454953 1321 + pseudogene predicted gene 12430
Alg2 4 47469833 to 47474370 4537 - protein coding gene asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase)
Cpgi14276 4 47473931 to 47475150 1219 CpG island CpG island 14276
Tssr41622 4 47474187 to 47474194 7 - TSS region transcription start site region 41622
Tssr41623 4 47474283 to 47474349 66 - TSS region transcription start site region 41623
Tssr37172 4 47474652 to 47474707 55 + TSS region transcription start site region 37172
Sec61b 4 47474661 to 47483233 8572 + protein coding gene Sec61 beta subunit
Tssr37173 4 47474715 to 47474726 11 + TSS region transcription start site region 37173
Tssr37174 4 47480034 to 47480040 6 + TSS region transcription start site region 37174
D4Mit271 4 47488954 to 47489076 122 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 271
Gm42283 4 47489242 to 47494855 5613 - lncRNA gene predicted gene, 42283
Gm27601 4 47593337 to 47593463 126 + unclassified non-coding RNA gene predicted gene, 27601
Gm42284 4 47595257 to 47606049 10792 - lncRNA gene predicted gene, 42284
Gm32487 4 47603417 to 47608287 4870 + lncRNA gene predicted gene, 32487
Gm27668 4 47603889 to 47604008 119 + unclassified non-coding RNA gene predicted gene, 27668
Gm32544 4 47626015 to 47638877 12862 - lncRNA gene predicted gene, 32544