Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:47253863-47486136

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Col15a1 4 47208161 to 47313167 105006 + protein coding gene collagen, type XV, alpha 1
Tssr37156 4 47259701 to 47259717 16 + TSS region transcription start site region 37156
Tssr1169 4 47284270 to 47284316 46 + TSS region transcription start site region 1169
Tssr37157 4 47285960 to 47285966 6 + TSS region transcription start site region 37157
Tssr37158 4 47287828 to 47287835 7 + TSS region transcription start site region 37158
Tssr37159 4 47288062 to 47288076 14 + TSS region transcription start site region 37159
Tssr37160 4 47288434 to 47288455 21 + TSS region transcription start site region 37160
Tssr41619 4 47302511 to 47302520 9 - TSS region transcription start site region 41619
Tssr41620 4 47302550 to 47302563 13 - TSS region transcription start site region 41620
Tssr37161 4 47306053 to 47306081 28 + TSS region transcription start site region 37161
Tssr37162 4 47312195 to 47312226 31 + TSS region transcription start site region 37162
Gm42282 4 47334016 to 47346595 12579 - lncRNA gene predicted gene, 42282
Tssr41621 4 47346570 to 47346616 46 - TSS region transcription start site region 41621
Cpgi14274 4 47352300 to 47354003 1703 CpG island CpG island 14274
Tssr37163 4 47353219 to 47353224 5 + TSS region transcription start site region 37163
Tgfbr1 4 47353222 to 47414926 61704 + protein coding gene transforming growth factor, beta receptor I
Tssr37164 4 47353231 to 47353265 34 + TSS region transcription start site region 37164
Tssr37165 4 47353283 to 47353304 21 + TSS region transcription start site region 37165
Gm32435 4 47353863 to 47386136 32273 - lncRNA gene predicted gene, 32435
Tssr37166 4 47367247 to 47367273 26 + TSS region transcription start site region 37166
Tssr37167 4 47386234 to 47386265 31 + TSS region transcription start site region 37167
Tssr37168 4 47387154 to 47387158 4 + TSS region transcription start site region 37168
Tssr37169 4 47409822 to 47409826 4 + TSS region transcription start site region 37169
Tssr37170 4 47412764 to 47412800 36 + TSS region transcription start site region 37170
Tssr37171 4 47413790 to 47413803 13 + TSS region transcription start site region 37171
Cpgi14275 4 47437596 to 47438271 675 CpG island CpG island 14275
Gm12430 4 47453632 to 47454953 1321 + pseudogene predicted gene 12430
Alg2 4 47469833 to 47474370 4537 - protein coding gene asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase)
Cpgi14276 4 47473931 to 47475150 1219 CpG island CpG island 14276
Tssr41622 4 47474187 to 47474194 7 - TSS region transcription start site region 41622
Tssr41623 4 47474283 to 47474349 66 - TSS region transcription start site region 41623
Tssr37172 4 47474652 to 47474707 55 + TSS region transcription start site region 37172
Sec61b 4 47474661 to 47483233 8572 + protein coding gene Sec61 beta subunit
Tssr37173 4 47474715 to 47474726 11 + TSS region transcription start site region 37173
Tssr37174 4 47480034 to 47480040 6 + TSS region transcription start site region 37174