Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:47008298-47408316

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm568 4 47008316 to 47010781 2465 - lincRNA gene predicted gene 568
Tssr41615 4 47010797 to 47010807 10 - TSS region transcription start site region 41615
Tssr41616 4 47011126 to 47011139 13 - TSS region transcription start site region 41616
Tssr37147 4 47011238 to 47011268 30 + TSS region transcription start site region 37147
Anks6 4 47015669 to 47057427 41758 - protein coding gene ankyrin repeat and sterile alpha motif domain containing 6
Gm12425 4 47041598 to 47041960 362 + pseudogene predicted gene 12425
Cpgi14269 4 47056584 to 47057733 1149 CpG island CpG island 14269
Tssr41617 4 47057015 to 47057018 3 - TSS region transcription start site region 41617
Tssr41618 4 47057296 to 47057356 60 - TSS region transcription start site region 41618
Gm12422 4 47071646 to 47071947 301 - pseudogene predicted gene 12422
Cpgi14270 4 47091617 to 47092847 1230 CpG island CpG island 14270
Galnt12 4 47091909 to 47123042 31133 + protein coding gene polypeptide N-acetylgalactosaminyltransferase 12
Tssr37148 4 47091913 to 47091969 56 + TSS region transcription start site region 37148
Gm12424 4 47101032 to 47101478 446 + pseudogene predicted gene 12424
Cpgi14271 4 47111396 to 47111726 330 CpG island CpG island 14271
Gm12423 4 47171669 to 47171803 134 + pseudogene predicted gene 12423
D4Mit229 4 47180913 to 47181039 126 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 229
Gm12426 4 47199114 to 47209308 10194 - antisense lncRNA gene predicted gene 12426
Cpgi14272 4 47207499 to 47209006 1507 CpG island CpG island 14272
Tssr37149 4 47207581 to 47207595 14 + TSS region transcription start site region 37149
Tssr37150 4 47208005 to 47208088 83 + TSS region transcription start site region 37150
Col15a1 4 47208161 to 47313167 105006 + protein coding gene collagen, type XV, alpha 1
Tssr37151 4 47208237 to 47208252 15 + TSS region transcription start site region 37151
Tssr37152 4 47208265 to 47208276 11 + TSS region transcription start site region 37152
Tssr37153 4 47208280 to 47208292 12 + TSS region transcription start site region 37153
Tssr37154 4 47208298 to 47208316 18 + TSS region transcription start site region 37154
Gm32317 4 47225158 to 47245344 20186 - lncRNA gene predicted gene, 32317
Tssr37155 4 47242395 to 47242404 9 + TSS region transcription start site region 37155
Cpgi14273 4 47245503 to 47245825 322 CpG island CpG island 14273
Tssr37156 4 47259701 to 47259717 16 + TSS region transcription start site region 37156
Tssr1169 4 47284270 to 47284316 46 + TSS region transcription start site region 1169
Tssr37157 4 47285960 to 47285966 6 + TSS region transcription start site region 37157
Tssr37158 4 47287828 to 47287835 7 + TSS region transcription start site region 37158
Tssr37159 4 47288062 to 47288076 14 + TSS region transcription start site region 37159
Tssr37160 4 47288434 to 47288455 21 + TSS region transcription start site region 37160
Tssr41619 4 47302511 to 47302520 9 - TSS region transcription start site region 41619
Tssr41620 4 47302550 to 47302563 13 - TSS region transcription start site region 41620
Tssr37161 4 47306053 to 47306081 28 + TSS region transcription start site region 37161
Tssr37162 4 47312195 to 47312226 31 + TSS region transcription start site region 37162
Gm42282 4 47334016 to 47346595 12579 - lncRNA gene predicted gene, 42282
Tssr41621 4 47346570 to 47346616 46 - TSS region transcription start site region 41621
Cpgi14274 4 47352300 to 47354003 1703 CpG island CpG island 14274
Tssr37163 4 47353219 to 47353224 5 + TSS region transcription start site region 37163
Tgfbr1 4 47353222 to 47414926 61704 + protein coding gene transforming growth factor, beta receptor I
Tssr37164 4 47353231 to 47353265 34 + TSS region transcription start site region 37164
Tssr37165 4 47353283 to 47353304 21 + TSS region transcription start site region 37165
Gm32435 4 47353863 to 47386136 32273 - lncRNA gene predicted gene, 32435
Tssr37166 4 47367247 to 47367273 26 + TSS region transcription start site region 37166
Tssr37167 4 47386234 to 47386265 31 + TSS region transcription start site region 37167
Tssr37168 4 47387154 to 47387158 4 + TSS region transcription start site region 37168