Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:46777038-47207042

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gabbr2 4 46663898 to 46991714 327816 - protein coding gene gamma-aminobutyric acid (GABA) B receptor, 2
Tssr37145 4 46787603 to 46787624 21 + TSS region transcription start site region 37145
Cpgi14267 4 46846136 to 46846439 303 CpG island CpG island 14267
Tssr37146 4 46854270 to 46854292 22 + TSS region transcription start site region 37146
Gm32208 4 46860170 to 46877704 17534 + lncRNA gene predicted gene, 32208
Gm32135 4 46884066 to 46897624 13558 + lncRNA gene predicted gene, 32135
Tssr41607 4 46941184 to 46941201 17 - TSS region transcription start site region 41607
Cpgi14268 4 46989984 to 46992460 2476 CpG island CpG island 14268
Tssr41608 4 46991516 to 46991527 11 - TSS region transcription start site region 41608
Tssr41609 4 46991536 to 46991650 114 - TSS region transcription start site region 41609
Tssr41610 4 46991678 to 46991714 36 - TSS region transcription start site region 41610
Tssr41611 4 46991761 to 46991782 21 - TSS region transcription start site region 41611
Tssr41612 4 46991822 to 46991831 9 - TSS region transcription start site region 41612
Tssr41613 4 46991842 to 46991916 74 - TSS region transcription start site region 41613
Tssr41614 4 46992038 to 46992042 4 - TSS region transcription start site region 41614
Gm568 4 47008316 to 47010781 2465 - lincRNA gene predicted gene 568
Tssr41615 4 47010797 to 47010807 10 - TSS region transcription start site region 41615
Tssr41616 4 47011126 to 47011139 13 - TSS region transcription start site region 41616
Tssr37147 4 47011238 to 47011268 30 + TSS region transcription start site region 37147
Anks6 4 47015669 to 47057427 41758 - protein coding gene ankyrin repeat and sterile alpha motif domain containing 6
Gm12425 4 47041598 to 47041960 362 + pseudogene predicted gene 12425
Cpgi14269 4 47056584 to 47057733 1149 CpG island CpG island 14269
Tssr41617 4 47057015 to 47057018 3 - TSS region transcription start site region 41617
Tssr41618 4 47057296 to 47057356 60 - TSS region transcription start site region 41618
Gm12422 4 47071646 to 47071947 301 - pseudogene predicted gene 12422
Cpgi14270 4 47091617 to 47092847 1230 CpG island CpG island 14270
Galnt12 4 47091909 to 47123042 31133 + protein coding gene polypeptide N-acetylgalactosaminyltransferase 12
Tssr37148 4 47091913 to 47091969 56 + TSS region transcription start site region 37148
Gm12424 4 47101032 to 47101478 446 + pseudogene predicted gene 12424
Cpgi14271 4 47111396 to 47111726 330 CpG island CpG island 14271
Gm12423 4 47171669 to 47171803 134 + pseudogene predicted gene 12423
D4Mit229 4 47180913 to 47181039 126 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 229
Gm12426 4 47199114 to 47209308 10194 - antisense lncRNA gene predicted gene 12426