Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:45528442-45788566

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Shb 4 45423276 to 45530828 107552 - protein coding gene src homology 2 domain-containing transforming protein B
Cpgi14236 4 45529248 to 45531331 2083 CpG island CpG island 14236
Tssr41545 4 45530752 to 45530816 64 - TSS region transcription start site region 41545
Gm22055 4 45548743 to 45548849 106 + snRNA gene predicted gene, 22055
Gm12411 4 45550017 to 45550499 482 + pseudogene predicted gene 12411
Gm12408 4 45639368 to 45645497 6129 + lincRNA gene predicted gene 12408
Tssr37068 4 45640777 to 45640790 13 + TSS region transcription start site region 37068
Stheal3 4 45658442 to 45658566 124 QTL soft tissue heal 3
Mmtg1 4 45658442 to 83180920 37522478 QTL modifier of mammary tumor growth 1
Lch 4 45658442 to 67182171 21523729 heritable phenotypic marker low cholesterol
D4Mit214 4 45658442 to 45658566 124 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 214
Lch2 4 45658442 to 67182171 21523729 heritable phenotypic marker low cholesterol 2
Gm829 4 45683589 to 45723338 39749 + lincRNA gene predicted gene 829
D4Mit55 4 45709925 to 45710107 182 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 55
Synch1 4 45709925 to 45710107 182 QTL synechia 1
Gm12410 4 45715169 to 45716421 1252 + lincRNA gene predicted gene 12410
Gm31563 4 45723773 to 45740301 16528 - lncRNA gene predicted gene, 31563
Cpgi14237 4 45741103 to 45741284 181 CpG island CpG island 14237
Tssr1163 4 45741950 to 45741952 2 + TSS region transcription start site region 1163
Cpgi14238 4 45755926 to 45756096 170 CpG island CpG island 14238
Gm12409 4 45762377 to 45764223 1846 - lncRNA gene predicted gene 12409
Cpgi14239 4 45763896 to 45764236 340 CpG island CpG island 14239
Tssr41546 4 45770738 to 45770743 5 - TSS region transcription start site region 41546
Gm12412 4 45776882 to 45777209 327 - pseudogene predicted gene 12412
Ath8 4 105299798 to 45658442 -59641356 QTL atherosclerosis 8
Ctrcts 4 138615442 to 45709925 -92905517 QTL cataract severity