MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:44878727-45008791

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Zcchc7	4	44756557 to 44932215	175658	+	protein coding gene	zinc finger, CCHC domain containing 7
Tssr37038	4	44880007 to 44880012	5	+	TSS region	transcription start site region 37038
Tssr37039	4	44884939 to 44884943	4	+	TSS region	transcription start site region 37039
A630057N01Rik	4	44915314 to 44919795	4481		unclassified gene	RIKEN cDNA A630057N01 gene
Tssr37040	4	44924168 to 44924171	3	+	TSS region	transcription start site region 37040
Tssr37041	4	44943727 to 44943791	64	+	TSS region	transcription start site region 37041
Gm12678	4	44943753 to 44948330	4577	+	lincRNA gene	predicted gene 12678
Tssr37042	4	44953269 to 44953309	40	+	TSS region	transcription start site region 37042
Gm30763	4	44956562 to 44959784	3222	-	lncRNA gene	predicted gene, 30763
Tssr37043	4	44967765 to 44967772	7	+	TSS region	transcription start site region 37043
Gm12493	4	44967769 to 44971096	3327	+	antisense lncRNA gene	predicted gene 12493
Gm12679	4	44970576 to 44978319	7743	-	antisense lncRNA gene	predicted gene 12679
Cpgi14224	4	44973676 to 44973884	208		CpG island	CpG island 14224
Cpgi14225	4	44981244 to 44981768	524		CpG island	CpG island 14225
Tssr37044	4	44981389 to 44981461	72	+	TSS region	transcription start site region 37044
Grhpr	4	44981395 to 44990734	9339	+	protein coding gene	glyoxylate reductase/hydroxypyruvate reductase
Tssr37045	4	44981478 to 44981485	7	+	TSS region	transcription start site region 37045
Zbtb5	4	44991242 to 45012412	21170	-	protein coding gene	zinc finger and BTB domain containing 5