Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:44706557-44982215

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pax5 4 44526269 to 44710440 184171 - protein coding gene paired box 5
D4Mit257 4 44709353 to 44709486 133 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 257
Tssr41519 4 44710648 to 44710672 24 - TSS region transcription start site region 41519
Tssr41520 4 44710687 to 44710721 34 - TSS region transcription start site region 41520
Cpgi14219 4 44710711 to 44711163 452 CpG island CpG island 14219
Tssr41521 4 44710761 to 44710774 13 - TSS region transcription start site region 41521
Tssr37032 4 44710914 to 44710918 4 + TSS region transcription start site region 37032
Tssr41522 4 44710963 to 44710977 14 - TSS region transcription start site region 41522
Cpgi14220 4 44711729 to 44712339 610 CpG island CpG island 14220
Cpgi14221 4 44712820 to 44713700 880 CpG island CpG island 14221
Cpgi14222 4 44714031 to 44714567 536 CpG island CpG island 14222
Tssr41523 4 44714321 to 44714352 31 - TSS region transcription start site region 41523
Gm12463 4 44752277 to 44753125 848 - pseudogene predicted gene 12463
Cpgi14223 4 44756126 to 44757155 1029 CpG island CpG island 14223
Tssr37033 4 44756553 to 44756601 48 + TSS region transcription start site region 37033
Zcchc7 4 44756557 to 44932215 175658 + protein coding gene zinc finger, CCHC domain containing 7
Tssr37034 4 44756609 to 44756682 73 + TSS region transcription start site region 37034
Tssr37035 4 44756686 to 44756697 11 + TSS region transcription start site region 37035
Tssr1161 4 44771436 to 44771446 10 + TSS region transcription start site region 1161
Tssr37036 4 44807513 to 44807530 17 + TSS region transcription start site region 37036
Tssr37037 4 44824085 to 44824089 4 + TSS region transcription start site region 37037
Gm22639 4 44865307 to 44865431 124 + miRNA gene predicted gene, 22639
Tssr37038 4 44880007 to 44880012 5 + TSS region transcription start site region 37038
Tssr37039 4 44884939 to 44884943 4 + TSS region transcription start site region 37039
A630057N01Rik 4 44915314 to 44919795 4481 unclassified gene RIKEN cDNA A630057N01 gene
Tssr37040 4 44924168 to 44924171 3 + TSS region transcription start site region 37040
Tssr37041 4 44943727 to 44943791 64 + TSS region transcription start site region 37041
Gm12678 4 44943753 to 44948330 4577 + lincRNA gene predicted gene 12678
Tssr37042 4 44953269 to 44953309 40 + TSS region transcription start site region 37042
Gm30763 4 44956562 to 44959784 3222 - lncRNA gene predicted gene, 30763
Tssr37043 4 44967765 to 44967772 7 + TSS region transcription start site region 37043
Gm12493 4 44967769 to 44971096 3327 + antisense lncRNA gene predicted gene 12493
Gm12679 4 44970576 to 44978319 7743 - antisense lncRNA gene predicted gene 12679
Cpgi14224 4 44973676 to 44973884 208 CpG island CpG island 14224
Cpgi14225 4 44981244 to 44981768 524 CpG island CpG island 14225
Tssr37044 4 44981389 to 44981461 72 + TSS region transcription start site region 37044
Grhpr 4 44981395 to 44990734 9339 + protein coding gene glyoxylate reductase/hydroxypyruvate reductase
Tssr37045 4 44981478 to 44981485 7 + TSS region transcription start site region 37045