Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Aaom1 | 4 | 22010477 | QTL | autoimmune aoritis in MRL mice 1 | ||
Ssrq9 | 4 | 11937616 | QTL | stress response QTL 9 | ||
Tssr37026 | 4 | 3 | + | TSS region | transcription start site region 37026 | |
D4Mit213 | 4 | 132 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 213 | ||
Tssr41509 | 4 | 3 | - | TSS region | transcription start site region 41509 | |
Pax5 | 4 | 184171 | - | protein coding gene | paired box 5 | |
Tssr41510 | 4 | 12 | - | TSS region | transcription start site region 41510 | |
Tssr41511 | 4 | 12 | - | TSS region | transcription start site region 41511 | |
Tssr41512 | 4 | 2 | - | TSS region | transcription start site region 41512 | |
Cpgi14215 | 4 | 583 | CpG island | CpG island 14215 | ||
Tssr41513 | 4 | 3 | - | TSS region | transcription start site region 41513 | |
Mir5120 | 4 | 77 | - | miRNA gene | microRNA 5120 | |
Tssr41514 | 4 | 12 | - | TSS region | transcription start site region 41514 | |
Tssr41515 | 4 | 6 | - | TSS region | transcription start site region 41515 | |
Cpgi14216 | 4 | 1300 | CpG island | CpG island 14216 | ||
Tssr37027 | 4 | 26 | + | TSS region | transcription start site region 37027 | |
Gm12462 | 4 | 20932 | + | antisense lncRNA gene | predicted gene 12462 | |
Tssr37028 | 4 | 12 | + | TSS region | transcription start site region 37028 | |
Tssr37029 | 4 | 6 | + | TSS region | transcription start site region 37029 | |
4930517J16Rik | 4 | 1567 | + | unclassified gene | RIKEN cDNA 4930517J16 gene | |
Tssr41516 | 4 | 9 | - | TSS region | transcription start site region 41516 | |
Tssr37030 | 4 | 42 | + | TSS region | transcription start site region 37030 | |
Cpgi14217 | 4 | 582 | CpG island | CpG island 14217 | ||
5730488B01Rik | 4 | 2310 | + | lncRNA gene | RIKEN cDNA 5730488B01 gene | |
Cpgi14218 | 4 | 1764 | CpG island | CpG island 14218 | ||
Tssr41517 | 4 | 13 | - | TSS region | transcription start site region 41517 | |
Tssr41518 | 4 | 33 | - | TSS region | transcription start site region 41518 | |
Tssr37031 | 4 | 4 | + | TSS region | transcription start site region 37031 | |
D4Mit257 | 4 | 133 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 257 | ||
Tssr41519 | 4 | 24 | - | TSS region | transcription start site region 41519 | |
Tssr41520 | 4 | 34 | - | TSS region | transcription start site region 41520 | |
Cpgi14219 | 4 | 452 | CpG island | CpG island 14219 | ||
Tssr41521 | 4 | 13 | - | TSS region | transcription start site region 41521 | |
Tssr37032 | 4 | 4 | + | TSS region | transcription start site region 37032 | |
Tssr41522 | 4 | 14 | - | TSS region | transcription start site region 41522 | |
Cpgi14220 | 4 | 610 | CpG island | CpG island 14220 | ||
Cpgi14221 | 4 | 880 | CpG island | CpG island 14221 | ||
Cpgi14222 | 4 | 536 | CpG island | CpG island 14222 | ||
Tssr41523 | 4 | 31 | - | TSS region | transcription start site region 41523 | |
Gm12463 | 4 | 848 | - | pseudogene | predicted gene 12463 | |
Cpgi14223 | 4 | 1029 | CpG island | CpG island 14223 | ||
Tssr37033 | 4 | 48 | + | TSS region | transcription start site region 37033 | |
Zcchc7 | 4 | 175658 | + | protein coding gene | zinc finger, CCHC domain containing 7 | |
Tssr37034 | 4 | 73 | + | TSS region | transcription start site region 37034 | |
Tssr37035 | 4 | 11 | + | TSS region | transcription start site region 37035 | |
Tssr1161 | 4 | 10 | + | TSS region | transcription start site region 1161 | |
Tssr37036 | 4 | 17 | + | TSS region | transcription start site region 37036 | |
Tssr37037 | 4 | 4 | + | TSS region | transcription start site region 37037 | |
Gm22639 | 4 | 124 | + | miRNA gene | predicted gene, 22639 | |
Tssr37038 | 4 | 5 | + | TSS region | transcription start site region 37038 | |
Tssr37039 | 4 | 4 | + | TSS region | transcription start site region 37039 | |
A630057N01Rik | 4 | 4481 | unclassified gene | RIKEN cDNA A630057N01 gene | ||
Tssr37040 | 4 | 3 | + | TSS region | transcription start site region 37040 | |
Tssr37041 | 4 | 64 | + | TSS region | transcription start site region 37041 | |
Gm12678 | 4 | 4577 | + | lincRNA gene | predicted gene 12678 | |
Tssr37042 | 4 | 40 | + | TSS region | transcription start site region 37042 | |
Gm30763 | 4 | 3222 | - | lncRNA gene | predicted gene, 30763 | |
Tssr37043 | 4 | 7 | + | TSS region | transcription start site region 37043 | |
Gm12493 | 4 | 3327 | + | antisense lncRNA gene | predicted gene 12493 | |
Gm12679 | 4 | 7743 | - | antisense lncRNA gene | predicted gene 12679 | |
Cpgi14224 | 4 | 208 | CpG island | CpG island 14224 | ||
Cpgi14225 | 4 | 524 | CpG island | CpG island 14225 | ||
Tssr37044 | 4 | 72 | + | TSS region | transcription start site region 37044 | |
Grhpr | 4 | 9339 | + | protein coding gene | glyoxylate reductase/hydroxypyruvate reductase | |
Tssr37045 | 4 | 7 | + | TSS region | transcription start site region 37045 | |
Zbtb5 | 4 | 21170 | - | protein coding gene | zinc finger and BTB domain containing 5 | |
Cpgi14226 | 4 | 1616 | CpG island | CpG island 14226 | ||
Tssr41524 | 4 | 44 | - | TSS region | transcription start site region 41524 | |
Tssr37046 | 4 | 20 | + | TSS region | transcription start site region 37046 | |
Tssr37047 | 4 | 13 | + | TSS region | transcription start site region 37047 | |
Tssr41525 | 4 | 28 | - | TSS region | transcription start site region 41525 | |
Tssr41526 | 4 | 19 | - | TSS region | transcription start site region 41526 | |
Tssr41527 | 4 | 66 | - | TSS region | transcription start site region 41527 | |
Tssr37048 | 4 | 36 | + | TSS region | transcription start site region 37048 | |
Tssr41528 | 4 | 38 | - | TSS region | transcription start site region 41528 | |
1700055D18Rik | 4 | 1948 | + | antisense lncRNA gene | RIKEN cDNA 1700055D18 gene | |
Tssr37049 | 4 | 49 | + | TSS region | transcription start site region 37049 | |
Tssr37050 | 4 | 5 | + | TSS region | transcription start site region 37050 | |
Cpgi14227 | 4 | 824 | CpG island | CpG island 14227 | ||
Polr1e | 4 | 15670 | + | protein coding gene | polymerase (RNA) I polypeptide E | |
Tssr37051 | 4 | 56 | + | TSS region | transcription start site region 37051 | |
Fbxo10 | 4 | 50357 | - | protein coding gene | F-box protein 10 | |
Gm30939 | 4 | 17050 | + | lncRNA gene | predicted gene, 30939 | |
D4Mit5 | 4 | 134 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 5 | ||
Im2 | 4 | 134 | QTL | immunoregulatory 2 | ||
Cpgi14228 | 4 | 941 | CpG island | CpG island 14228 | ||
Tssr41529 | 4 | 65 | - | TSS region | transcription start site region 41529 | |
Tomm5 | 4 | 2904 | - | protein coding gene | translocase of outer mitochondrial membrane 5 | |
Cpgi14229 | 4 | 608 | CpG island | CpG island 14229 | ||
Tssr41530 | 4 | 59 | - | TSS region | transcription start site region 41530 | |
Tssr37052 | 4 | 17 | + | TSS region | transcription start site region 37052 | |
D4Mit1006 | 4 | 149 | DNA segment | DNA Segment, Chr 4, Massachusetts Institute of Technology 1006 | ||
Tssr37053 | 4 | 3 | + | TSS region | transcription start site region 37053 | |
Gm12566 | 4 | 358 | - | pseudogene | predicted gene 12566 | |
Cpgi14230 | 4 | 180 | CpG island | CpG island 14230 | ||
Cpgi14231 | 4 | 1347 | CpG island | CpG island 14231 | ||
Tssr37054 | 4 | 38 | + | TSS region | transcription start site region 37054 | |
Tssr37055 | 4 | 36 | + | TSS region | transcription start site region 37055 | |
Frmpd1 | 4 | 101061 | + | protein coding gene | FERM and PDZ domain containing 1 | |
Tssr37056 | 4 | 5 | + | TSS region | transcription start site region 37056 | |
Tssr37057 | 4 | 5 | + | TSS region | transcription start site region 37057 | |
Tssr37058 | 4 | 10 | + | TSS region | transcription start site region 37058 | |
D4Mit238 | 4 | 110 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 238 | ||
Frmpd1os | 4 | 9267 | - | antisense lncRNA gene | FERM and PDZ domain containing 1, opposite strand | |
Trmt10b | 4 | 19004 | + | protein coding gene | tRNA methyltransferase 10B | |
Tssr37059 | 4 | 25 | + | TSS region | transcription start site region 37059 | |
Cpgi14232 | 4 | 253 | CpG island | CpG island 14232 | ||
Exosc3 | 4 | 3974 | - | protein coding gene | exosome component 3 | |
Cpgi14233 | 4 | 833 | CpG island | CpG island 14233 | ||
Tssr41531 | 4 | 13 | - | TSS region | transcription start site region 41531 | |
Tssr37060 | 4 | 10 | + | TSS region | transcription start site region 37060 | |
Tssr41532 | 4 | 62 | - | TSS region | transcription start site region 41532 | |
Tssr37061 | 4 | 12 | + | TSS region | transcription start site region 37061 | |
Tssr37062 | 4 | 11 | + | TSS region | transcription start site region 37062 | |
Tssr41533 | 4 | 11 | - | TSS region | transcription start site region 41533 | |
Tssr41534 | 4 | 54 | - | TSS region | transcription start site region 41534 | |
Tssr37063 | 4 | 2 | + | TSS region | transcription start site region 37063 | |
Gm31017 | 4 | 4401 | - | lncRNA gene | predicted gene, 31017 | |
D4Mit138 | 4 | 128 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 138 | ||
Gm12585 | 4 | 289 | - | pseudogene | predicted gene 12585 | |
Cpgi14234 | 4 | 1206 | CpG island | CpG island 14234 | ||
Tssr37064 | 4 | 71 | + | TSS region | transcription start site region 37064 | |
Dcaf10 | 4 | 37638 | + | protein coding gene | DDB1 and CUL4 associated factor 10 | |
Tssr37065 | 4 | 50 | + | TSS region | transcription start site region 37065 | |
Tssr37066 | 4 | 30 | + | TSS region | transcription start site region 37066 | |
Tssr1162 | 4 | 28 | - | TSS region | transcription start site region 1162 | |
Tssr41535 | 4 | 35 | - | TSS region | transcription start site region 41535 | |
Slc25a51 | 4 | 12843 | - | protein coding gene | solute carrier family 25, member 51 | |
Gm25692 | 4 | 124 | - | miRNA gene | predicted gene, 25692 | |
Tssr41536 | 4 | 13 | - | TSS region | transcription start site region 41536 | |
Cpgi14235 | 4 | 1191 | CpG island | CpG island 14235 | ||
Tssr41537 | 4 | 47 | - | TSS region | transcription start site region 41537 | |
Tssr41538 | 4 | 29 | - | TSS region | transcription start site region 41538 | |
Tssr41539 | 4 | 29 | - | TSS region | transcription start site region 41539 | |
Tssr37067 | 4 | 3 | + | TSS region | transcription start site region 37067 | |
Gm46852 | 4 | 13823 | + | lncRNA gene | predicted gene, 46852 | |
Tssr41540 | 4 | 12 | - | TSS region | transcription start site region 41540 | |
Shb | 4 | 107552 | - | protein coding gene | src homology 2 domain-containing transforming protein B | |
Tssr41541 | 4 | 14 | - | TSS region | transcription start site region 41541 | |
Tssr41542 | 4 | 11 | - | TSS region | transcription start site region 41542 | |
Tssr41543 | 4 | 11 | - | TSS region | transcription start site region 41543 | |
Gm22518 | 4 | 67 | - | miRNA gene | predicted gene, 22518 | |
Tssr41544 | 4 | 3 | - | TSS region | transcription start site region 41544 | |
Cpgi14236 | 4 | 2083 | CpG island | CpG island 14236 | ||
Tssr41545 | 4 | 64 | - | TSS region | transcription start site region 41545 | |
Gm22055 | 4 | 106 | + | snRNA gene | predicted gene, 22055 | |
Gm12411 | 4 | 482 | + | pseudogene | predicted gene 12411 | |
Gm12408 | 4 | 6129 | + | lincRNA gene | predicted gene 12408 | |
Tssr37068 | 4 | 13 | + | TSS region | transcription start site region 37068 | |
D4Mit214 | 4 | 124 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 214 | ||
Stheal3 | 4 | 124 | QTL | soft tissue heal 3 | ||
Mmtg1 | 4 | 37522478 | QTL | modifier of mammary tumor growth 1 | ||
Lch | 4 | 21523729 | heritable phenotypic marker | low cholesterol | ||
Lch2 | 4 | 21523729 | heritable phenotypic marker | low cholesterol 2 | ||
Gm829 | 4 | 39749 | + | lincRNA gene | predicted gene 829 | |
D4Mit55 | 4 | 182 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 55 | ||
Synch1 | 4 | 182 | QTL | synechia 1 | ||
Gm12410 | 4 | 1252 | + | lincRNA gene | predicted gene 12410 | |
Gm31563 | 4 | 16528 | - | lncRNA gene | predicted gene, 31563 | |
Cpgi14237 | 4 | 181 | CpG island | CpG island 14237 | ||
Tssr1163 | 4 | 2 | + | TSS region | transcription start site region 1163 | |
Cpgi14238 | 4 | 170 | CpG island | CpG island 14238 | ||
Gm12409 | 4 | 1846 | - | lncRNA gene | predicted gene 12409 | |
Cpgi14239 | 4 | 340 | CpG island | CpG island 14239 | ||
Tssr41546 | 4 | 5 | - | TSS region | transcription start site region 41546 | |
Gm12412 | 4 | 327 | - | pseudogene | predicted gene 12412 | |
Tssr37069 | 4 | 40 | + | TSS region | transcription start site region 37069 | |
Cpgi14240 | 4 | 413 | CpG island | CpG island 14240 | ||
Tssr37070 | 4 | 40 | + | TSS region | transcription start site region 37070 | |
Aldh1b1 | 4 | 5582 | + | protein coding gene | aldehyde dehydrogenase 1 family, member B1 | |
Tssr37071 | 4 | 90 | + | TSS region | transcription start site region 37071 | |
Tssr37072 | 4 | 23 | + | TSS region | transcription start site region 37072 | |
Igfbpl1 | 4 | 17320 | - | protein coding gene | insulin-like growth factor binding protein-like 1 | |
Tssr41547 | 4 | 28 | - | TSS region | transcription start site region 41547 | |
Tssr41548 | 4 | 4 | - | TSS region | transcription start site region 41548 | |
Tssr41549 | 4 | 12 | - | TSS region | transcription start site region 41549 | |
Tssr41550 | 4 | 6 | - | TSS region | transcription start site region 41550 | |
Tssr37073 | 4 | 44 | + | TSS region | transcription start site region 37073 | |
Cpgi14241 | 4 | 1308 | CpG island | CpG island 14241 | ||
Tssr41551 | 4 | 11 | - | TSS region | transcription start site region 41551 | |
Tssr41552 | 4 | 15 | - | TSS region | transcription start site region 41552 | |
Tssr41553 | 4 | 11 | - | TSS region | transcription start site region 41553 | |
Tssr41554 | 4 | 16 | - | TSS region | transcription start site region 41554 | |
Tssr41555 | 4 | 11 | - | TSS region | transcription start site region 41555 | |
D4Mit269 | 4 | 221 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 269 | ||
Tssr37074 | 4 | 48 | + | TSS region | transcription start site region 37074 | |
Stra6l | 4 | 38344 | + | protein coding gene | STRA6-like | |
Tssr37075 | 4 | 21 | + | TSS region | transcription start site region 37075 | |
Tssr37076 | 4 | 27 | + | TSS region | transcription start site region 37076 | |
Tssr37077 | 4 | 30 | + | TSS region | transcription start site region 37077 | |
Tssr37078 | 4 | 58 | + | TSS region | transcription start site region 37078 | |
Tssr37079 | 4 | 16 | + | TSS region | transcription start site region 37079 | |
Cpgi14242 | 4 | 282 | CpG island | CpG island 14242 | ||
Ccdc180 | 4 | 60471 | + | protein coding gene | coiled-coil domain containing 180 | |
Tssr37080 | 4 | 33 | + | TSS region | transcription start site region 37080 | |
Tssr37081 | 4 | 6 | + | TSS region | transcription start site region 37081 | |
Tssr37082 | 4 | 33 | + | TSS region | transcription start site region 37082 | |
Tssr37083 | 4 | 51 | + | TSS region | transcription start site region 37083 | |
Cpgi14243 | 4 | 347 | CpG island | CpG island 14243 | ||
Tssr37084 | 4 | 15 | + | TSS region | transcription start site region 37084 |