Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:43917360-44147373

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Reck 4 43875530 to 43944806 69276 + protein coding gene reversion-inducing-cysteine-rich protein with kazal motifs
Tssr37002 4 43937319 to 43937331 12 + TSS region transcription start site region 37002
Tssr37003 4 43937341 to 43937380 39 + TSS region transcription start site region 37003
Gm30377 4 43955718 to 43957476 1758 - lncRNA gene predicted gene, 30377
Cpgi14202 4 43957160 to 43958430 1270 CpG island CpG island 14202
Tssr37004 4 43957461 to 43957496 35 + TSS region transcription start site region 37004
Tssr37005 4 43957501 to 43957527 26 + TSS region transcription start site region 37005
Tssr37006 4 43957678 to 43957735 57 + TSS region transcription start site region 37006
Glipr2 4 43957702 to 43979118 21416 + protein coding gene GLI pathogenesis-related 2
Tssr37007 4 43965550 to 43965555 5 + TSS region transcription start site region 37007
Tssr1158 4 43966350 to 43966379 29 + TSS region transcription start site region 1158
Tssr41478 4 43972161 to 43972172 11 - TSS region transcription start site region 41478
Tssr37008 4 43972487 to 43972490 3 + TSS region transcription start site region 37008
Tssr37009 4 43977804 to 43977813 9 + TSS region transcription start site region 37009
Cpgi14203 4 43982446 to 43982623 177 CpG island CpG island 14203
Tssr37010 4 43983473 to 43983491 18 + TSS region transcription start site region 37010
Ccin 4 43983483 to 43985423 1940 + protein coding gene calicin
Tssr37011 4 43983496 to 43983523 27 + TSS region transcription start site region 37011
Cpgi14204 4 43983682 to 43985081 1399 CpG island CpG island 14204
D4Mit109 4 43991532 to 43991679 147 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 109
Tssr37012 4 44004438 to 44004455 17 + TSS region transcription start site region 37012
Clta 4 44004452 to 44032846 28394 + protein coding gene clathrin, light polypeptide (Lca)
Cpgi14205 4 44012369 to 44013330 961 CpG island CpG island 14205
Tssr41479 4 44012485 to 44012528 43 - TSS region transcription start site region 41479
Tssr37013 4 44012657 to 44012660 3 + TSS region transcription start site region 37013
Tssr37014 4 44012661 to 44012694 33 + TSS region transcription start site region 37014
Tssr37015 4 44012954 to 44012983 29 + TSS region transcription start site region 37015
Tssr37016 4 44018796 to 44018816 20 + TSS region transcription start site region 37016
Tssr37017 4 44019864 to 44019891 27 + TSS region transcription start site region 37017
Tssr37018 4 44019930 to 44019946 16 + TSS region transcription start site region 37018
Tssr41480 4 44025522 to 44025571 49 - TSS region transcription start site region 41480
Cpgi14206 4 44029770 to 44030007 237 CpG island CpG island 14206
Tssr37019 4 44032360 to 44032373 13 + TSS region transcription start site region 37019
Gne 4 44034075 to 44084177 50102 - protein coding gene glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
Tssr41481 4 44067044 to 44067061 17 - TSS region transcription start site region 41481
Cpgi14207 4 44072069 to 44073067 998 CpG island CpG island 14207
Tssr41482 4 44072532 to 44072557 25 - TSS region transcription start site region 41482
Tssr41483 4 44072578 to 44072693 115 - TSS region transcription start site region 41483
Tssr41484 4 44072712 to 44072731 19 - TSS region transcription start site region 41484
Tssr41485 4 44073016 to 44073021 5 - TSS region transcription start site region 41485
Gm22706 4 44081289 to 44081400 111 - snRNA gene predicted gene, 22706
Tssr41486 4 44084167 to 44084187 20 - TSS region transcription start site region 41486
Gm12503 4 44092632 to 44109311 16679 + unclassified non-coding RNA gene predicted gene 12503
Cpgi14208 4 44106408 to 44106610 202 CpG island CpG island 14208
Tssr37020 4 44106536 to 44106560 24 + TSS region transcription start site region 37020
Gm12504 4 44121893 to 44124123 2230 + pseudogene predicted pseudogene 12504
Rnf38 4 44126210 to 44233643 107433 - protein coding gene ring finger protein 38
Tssr41487 4 44126682 to 44126687 5 - TSS region transcription start site region 41487
Tssr41488 4 44129121 to 44129126 5 - TSS region transcription start site region 41488
Tssr41489 4 44143475 to 44143503 28 - TSS region transcription start site region 41489