Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:43251259-43425135

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Unc13b 4 43058953 to 43264871 205918 + protein coding gene unc-13 homolog B
Tssr36929 4 43257768 to 43257777 9 + TSS region transcription start site region 36929
Tssr36930 4 43257861 to 43257875 14 + TSS region transcription start site region 36930
Tssr36931 4 43264249 to 43264256 7 + TSS region transcription start site region 36931
Cpgi14183 4 43267007 to 43267296 289 CpG island CpG island 14183
Atp8b5 4 43267159 to 43373833 106674 + protein coding gene ATPase, class I, type 8B, member 5
Tssr36932 4 43267165 to 43267204 39 + TSS region transcription start site region 36932
Gm46851 4 43336259 to 43340163 3904 - lncRNA gene predicted gene, 46851
Tssr41403 4 43340132 to 43340137 5 - TSS region transcription start site region 41403
Gm46850 4 43360355 to 43381907 21552 - lncRNA gene predicted gene, 46850
Cpgi14184 4 43381424 to 43382705 1281 CpG island CpG island 14184
Rusc2 4 43381979 to 43427088 45109 + protein coding gene RUN and SH3 domain containing 2
Tssr36933 4 43382034 to 43382084 50 + TSS region transcription start site region 36933
Tssr36934 4 43382094 to 43382138 44 + TSS region transcription start site region 36934
Tssr36935 4 43383117 to 43383121 4 + TSS region transcription start site region 36935
Tssr41404 4 43383315 to 43383338 23 - TSS region transcription start site region 41404
Tssr36936 4 43383417 to 43383428 11 + TSS region transcription start site region 36936
Tssr36937 4 43383451 to 43383515 64 + TSS region transcription start site region 36937
Tssr36938 4 43383518 to 43383528 10 + TSS region transcription start site region 36938
Tssr41405 4 43384149 to 43384160 11 - TSS region transcription start site region 41405
Tssr36939 4 43384240 to 43384249 9 + TSS region transcription start site region 36939
Tssr36940 4 43384273 to 43384286 13 + TSS region transcription start site region 36940
Tssr36941 4 43384338 to 43384350 12 + TSS region transcription start site region 36941
Tssr36942 4 43392103 to 43392110 7 + TSS region transcription start site region 36942
Tssr36943 4 43394953 to 43394958 5 + TSS region transcription start site region 36943
Tssr41406 4 43399769 to 43399799 30 - TSS region transcription start site region 41406
Tssr36944 4 43401232 to 43401293 61 + TSS region transcription start site region 36944
Tssr41407 4 43406018 to 43406053 35 - TSS region transcription start site region 41407
Tssr36945 4 43406266 to 43406277 11 + TSS region transcription start site region 36945
Cpgi14185 4 43406421 to 43406708 287 CpG island CpG island 14185
Tssr36946 4 43406490 to 43406615 125 + TSS region transcription start site region 36946
Tssr36947 4 43414721 to 43414733 12 + TSS region transcription start site region 36947
Tssr36948 4 43416149 to 43416174 25 + TSS region transcription start site region 36948
Cpgi14186 4 43421514 to 43421779 265 CpG island CpG island 14186