Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:43049443-43449500

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26881 4 43046155 to 43053256 7101 + antisense lncRNA gene predicted gene, 26881
Cpgi14182 4 43058713 to 43059648 935 CpG island CpG island 14182
Tssr36921 4 43058939 to 43058962 23 + TSS region transcription start site region 36921
Unc13b 4 43058953 to 43264871 205918 + protein coding gene unc-13 homolog B
Tssr36922 4 43058976 to 43059011 35 + TSS region transcription start site region 36922
Tssr36923 4 43059028 to 43059045 17 + TSS region transcription start site region 36923
Tssr36924 4 43135814 to 43135818 4 + TSS region transcription start site region 36924
Gm23709 4 43136499 to 43136628 129 - snoRNA gene predicted gene, 23709
D4Mit182 4 43161464 to 43161598 134 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 182
D4Mit286 4 43196900 to 43196995 95 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 286
D4Dcr36 4 43200527 to 43200627 100 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 36
Gm25010 4 43201149 to 43201213 64 - snRNA gene predicted gene, 25010
Tssr36925 4 43209224 to 43209275 51 + TSS region transcription start site region 36925
Tssr36926 4 43209286 to 43209309 23 + TSS region transcription start site region 36926
Tssr36927 4 43249443 to 43249500 57 + TSS region transcription start site region 36927
Tssr36928 4 43249574 to 43249600 26 + TSS region transcription start site region 36928
Tssr36929 4 43257768 to 43257777 9 + TSS region transcription start site region 36929
Tssr36930 4 43257861 to 43257875 14 + TSS region transcription start site region 36930
Tssr36931 4 43264249 to 43264256 7 + TSS region transcription start site region 36931
Cpgi14183 4 43267007 to 43267296 289 CpG island CpG island 14183
Atp8b5 4 43267159 to 43373833 106674 + protein coding gene ATPase, class I, type 8B, member 5
Tssr36932 4 43267165 to 43267204 39 + TSS region transcription start site region 36932
Gm46851 4 43336259 to 43340163 3904 - lncRNA gene predicted gene, 46851
Tssr41403 4 43340132 to 43340137 5 - TSS region transcription start site region 41403
Gm46850 4 43360355 to 43381907 21552 - lncRNA gene predicted gene, 46850
Cpgi14184 4 43381424 to 43382705 1281 CpG island CpG island 14184
Rusc2 4 43381979 to 43427088 45109 + protein coding gene RUN and SH3 domain containing 2
Tssr36933 4 43382034 to 43382084 50 + TSS region transcription start site region 36933
Tssr36934 4 43382094 to 43382138 44 + TSS region transcription start site region 36934
Tssr36935 4 43383117 to 43383121 4 + TSS region transcription start site region 36935
Tssr41404 4 43383315 to 43383338 23 - TSS region transcription start site region 41404
Tssr36936 4 43383417 to 43383428 11 + TSS region transcription start site region 36936
Tssr36937 4 43383451 to 43383515 64 + TSS region transcription start site region 36937
Tssr36938 4 43383518 to 43383528 10 + TSS region transcription start site region 36938
Tssr41405 4 43384149 to 43384160 11 - TSS region transcription start site region 41405
Tssr36939 4 43384240 to 43384249 9 + TSS region transcription start site region 36939
Tssr36940 4 43384273 to 43384286 13 + TSS region transcription start site region 36940
Tssr36941 4 43384338 to 43384350 12 + TSS region transcription start site region 36941
Tssr36942 4 43392103 to 43392110 7 + TSS region transcription start site region 36942
Tssr36943 4 43394953 to 43394958 5 + TSS region transcription start site region 36943
Tssr41406 4 43399769 to 43399799 30 - TSS region transcription start site region 41406
Tssr36944 4 43401232 to 43401293 61 + TSS region transcription start site region 36944
Tssr41407 4 43406018 to 43406053 35 - TSS region transcription start site region 41407
Tssr36945 4 43406266 to 43406277 11 + TSS region transcription start site region 36945
Cpgi14185 4 43406421 to 43406708 287 CpG island CpG island 14185
Tssr36946 4 43406490 to 43406615 125 + TSS region transcription start site region 36946
Tssr36947 4 43414721 to 43414733 12 + TSS region transcription start site region 36947
Tssr36948 4 43416149 to 43416174 25 + TSS region transcription start site region 36948
Cpgi14186 4 43421514 to 43421779 265 CpG island CpG island 14186
Cpgi14187 4 43425745 to 43426002 257 CpG island CpG island 14187
Fam166b 4 43427019 to 43429134 2115 - protein coding gene family with sequence similarity 166, member B
Cpgi14188 4 43427465 to 43427746 281 CpG island CpG island 14188
Tssr41408 4 43429071 to 43429088 17 - TSS region transcription start site region 41408
Tssr41409 4 43429128 to 43429139 11 - TSS region transcription start site region 41409
Cpgi14189 4 43441851 to 43444145 2294 CpG island CpG island 14189
Tssr36949 4 43442236 to 43442315 79 + TSS region transcription start site region 36949
Tesk1 4 43442277 to 43448075 5798 + protein coding gene testis specific protein kinase 1
Tssr36950 4 43442320 to 43442339 19 + TSS region transcription start site region 36950
Tssr36951 4 43442360 to 43442369 9 + TSS region transcription start site region 36951
Tssr36952 4 43442402 to 43442411 9 + TSS region transcription start site region 36952
Tssr36953 4 43442468 to 43442483 15 + TSS region transcription start site region 36953
Tssr36954 4 43442484 to 43442501 17 + TSS region transcription start site region 36954
Tssr36955 4 43442514 to 43442527 13 + TSS region transcription start site region 36955
Tssr36956 4 43442560 to 43442567 7 + TSS region transcription start site region 36956
Tssr41410 4 43442958 to 43442973 15 - TSS region transcription start site region 41410
Tssr36957 4 43443079 to 43443090 11 + TSS region transcription start site region 36957
Tssr36958 4 43443102 to 43443130 28 + TSS region transcription start site region 36958
Tssr36959 4 43443135 to 43443156 21 + TSS region transcription start site region 36959
Tssr36960 4 43443157 to 43443169 12 + TSS region transcription start site region 36960
Tssr36961 4 43446005 to 43446028 23 + TSS region transcription start site region 36961
Cd72 4 43447724 to 43454741 7017 - protein coding gene CD72 antigen