Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 4:42958953-43364871

Filter by:
63 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dnajb5 4 42949814 to 42959425 9611 + protein coding gene DnaJ heat shock protein family (Hsp40) member B5
Tssr36917 4 42969945 to 42969951 6 + TSS region transcription start site region 36917
1700022I11Rik 4 42969946 to 42974325 4379 + protein coding gene RIKEN cDNA 1700022I11 gene
Tssr36918 4 42969953 to 42969965 12 + TSS region transcription start site region 36918
Vcp 4 42979964 to 43000507 20543 - protein coding gene valosin containing protein
Cpgi14175 4 42999523 to 43000771 1248 CpG island CpG island 14175
Tssr41384 4 43000451 to 43000485 34 - TSS region transcription start site region 41384
Fancg 4 43002343 to 43010506 8163 - protein coding gene Fanconi anemia, complementation group G
Tssr41385 4 43003890 to 43003893 3 - TSS region transcription start site region 41385
Tssr41386 4 43005900 to 43005906 6 - TSS region transcription start site region 41386
Cpgi14176 4 43010081 to 43010629 548 CpG island CpG island 14176
Tssr41387 4 43010226 to 43010271 45 - TSS region transcription start site region 41387
Tssr41388 4 43010499 to 43010537 38 - TSS region transcription start site region 41388
Pigo 4 43017635 to 43025819 8184 - protein coding gene phosphatidylinositol glycan anchor biosynthesis, class O
Cpgi14177 4 43020697 to 43021066 369 CpG island CpG island 14177
Cpgi14178 4 43025337 to 43025984 647 CpG island CpG island 14178
Tssr41389 4 43025765 to 43025788 23 - TSS region transcription start site region 41389
Tssr41390 4 43025792 to 43025832 40 - TSS region transcription start site region 41390
Stoml2 4 43027690 to 43031710 4020 - protein coding gene stomatin (Epb7.2)-like 2
Tssr41391 4 43030440 to 43030445 5 - TSS region transcription start site region 41391
Cpgi14179 4 43030794 to 43031670 876 CpG island CpG island 14179
Tssr41392 4 43031377 to 43031427 50 - TSS region transcription start site region 41392
Tssr41393 4 43031429 to 43031434 5 - TSS region transcription start site region 41393
Fam214b 4 43032414 to 43046220 13806 - protein coding gene family with sequence similarity 214, member B
Tssr41394 4 43038653 to 43038656 3 - TSS region transcription start site region 41394
Cpgi14180 4 43039901 to 43040565 664 CpG island CpG island 14180
Tssr41395 4 43040151 to 43040173 22 - TSS region transcription start site region 41395
Tssr41396 4 43040248 to 43040272 24 - TSS region transcription start site region 41396
Tssr41397 4 43040279 to 43040319 40 - TSS region transcription start site region 41397
Cpgi14181 4 43045559 to 43046275 716 CpG island CpG island 14181
Tssr41398 4 43045686 to 43045747 61 - TSS region transcription start site region 41398
Gm26881 4 43045966 to 43053254 7288 + lncRNA gene predicted gene, 26881
Tssr36919 4 43046014 to 43046043 29 + TSS region transcription start site region 36919
Tssr41399 4 43046136 to 43046154 18 - TSS region transcription start site region 41399
Tssr41400 4 43046162 to 43046173 11 - TSS region transcription start site region 41400
Tssr41401 4 43046174 to 43046188 14 - TSS region transcription start site region 41401
Tssr41402 4 43046196 to 43046216 20 - TSS region transcription start site region 41402
Tssr36920 4 43046291 to 43046315 24 + TSS region transcription start site region 36920
Cpgi14182 4 43058713 to 43059648 935 CpG island CpG island 14182
Tssr36921 4 43058939 to 43058962 23 + TSS region transcription start site region 36921
Unc13b 4 43058953 to 43264871 205918 + protein coding gene unc-13 homolog B
Tssr36922 4 43058976 to 43059011 35 + TSS region transcription start site region 36922
Tssr36923 4 43059028 to 43059045 17 + TSS region transcription start site region 36923
Tssr36924 4 43135814 to 43135818 4 + TSS region transcription start site region 36924
Gm23709 4 43136499 to 43136628 129 - snoRNA gene predicted gene, 23709
D4Mit182 4 43161464 to 43161598 134 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 182
D4Mit286 4 43196900 to 43196995 95 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 286
D4Dcr36 4 43200527 to 43200627 100 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 36
Gm25010 4 43201149 to 43201210 61 - snRNA gene predicted gene, 25010
Tssr36925 4 43209224 to 43209275 51 + TSS region transcription start site region 36925
Tssr36926 4 43209286 to 43209309 23 + TSS region transcription start site region 36926
Tssr36927 4 43249443 to 43249500 57 + TSS region transcription start site region 36927
Tssr36928 4 43249574 to 43249600 26 + TSS region transcription start site region 36928
Tssr36929 4 43257768 to 43257777 9 + TSS region transcription start site region 36929
Tssr36930 4 43257861 to 43257875 14 + TSS region transcription start site region 36930
Tssr36931 4 43264249 to 43264256 7 + TSS region transcription start site region 36931
Cpgi14183 4 43267007 to 43267296 289 CpG island CpG island 14183
Atp8b5 4 43267159 to 43373833 106674 + protein coding gene ATPase, class I, type 8B, member 5
Tssr36932 4 43267165 to 43267204 39 + TSS region transcription start site region 36932
Gm46851 4 43336259 to 43340163 3904 - lncRNA gene predicted gene, 46851
Tssr41403 4 43340132 to 43340137 5 - TSS region transcription start site region 41403
Gm46850 4 43360355 to 43381983 21628 - lncRNA gene predicted gene, 46850
Tibw2 4 108500000 to 43000000 -65500000 QTL tibia width 2, proximal, 10 week