Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:4258507-5698874

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm33007 4 4377272 to 4418084 40812 + lncRNA gene predicted gene, 33007
Tssr40838 4 4464126 to 4464129 3 - TSS region transcription start site region 40838
Gm33057 4 4523523 to 4543169 19646 + lncRNA gene predicted gene, 33057
Gm11780 4 4528204 to 4528719 515 - pseudogene predicted gene 11780
Tssr40839 4 4529437 to 4529464 27 - TSS region transcription start site region 40839
Gm33182 4 4543272 to 4564877 21605 + lncRNA gene predicted gene, 33182
Tssr40840 4 4576403 to 4576415 12 - TSS region transcription start site region 40840
Gm33259 4 4622587 to 4625490 2903 + lncRNA gene predicted gene, 33259
Gm26436 4 4729573 to 4729704 131 + snoRNA gene predicted gene, 26436
Impad1 4 4764342 to 4793306 28964 - protein coding gene inositol monophosphatase domain containing 1
Tssr40841 4 4765403 to 4765407 4 - TSS region transcription start site region 40841
Cpgi13997 4 4792423 to 4793476 1053 CpG island CpG island 13997
Tssr40842 4 4793275 to 4793382 107 - TSS region transcription start site region 40842
Gm18933 4 4944226 to 4944855 629 - pseudogene predicted gene, 18933
Gm11779 4 4978507 to 4978874 367 - pseudogene predicted gene 11779
Tssr36373 4 5153047 to 5153053 6 + TSS region transcription start site region 36373
D4Mit316 4 5263968 to 5264079 111 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 316
Tssr36374 4 5472440 to 5472445 5 + TSS region transcription start site region 36374
Tssr36375 4 5536821 to 5536825 4 + TSS region transcription start site region 36375
Gm11782 4 5545238 to 5551223 5985 - lincRNA gene predicted gene 11782
Gm11781 4 5602924 to 5603395 471 - pseudogene predicted gene 11781
Tssr36376 4 5611846 to 5611856 10 + TSS region transcription start site region 36376
4930423M02Rik 4 5632328 to 5642284 9956 + lincRNA gene RIKEN cDNA 4930423M02 gene
Tssr36377 4 5632331 to 5632340 9 + TSS region transcription start site region 36377
Cpgi13998 4 5643825 to 5644860 1035 CpG island CpG island 13998
Fam110b 4 5644079 to 5801101 157022 + protein coding gene family with sequence similarity 110, member B
Tssr36378 4 5644084 to 5644129 45 + TSS region transcription start site region 36378
Tssr36379 4 5644133 to 5644211 78 + TSS region transcription start site region 36379
Tssr36380 4 5644216 to 5644240 24 + TSS region transcription start site region 36380
Tssr36381 4 5644268 to 5644279 11 + TSS region transcription start site region 36381
Gm24337 4 5687677 to 5687802 125 - snoRNA gene predicted gene, 24337