MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:42246965-42671867

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr164683	4	42255690 to 42255697	7	+	TSS region	transcription start site region 164683
Ccl21b	4	42255767 to 42256432	665	+	protein coding gene	chemokine (C-C motif) ligand 21B (leucine)
Gm21980	4	42293436 to 42293841	405	-	lincRNA gene	predicted gene 21980
Gm21953	4	42294267 to 42294855	588	+	protein coding gene	predicted gene, 21953
Fam205a3	4	42318334 to 42323929	5595	+	protein coding gene	family with sequence similarity 205, member A3
Gm46857	4	42373478 to 42379575	6097	-	pseudogene	predicted gene, 46857
Gm46892	4	42373478 to 42386157	12679	-	pseudogene	predicted gene, 46892
Gm21586	4	42439378 to 42439966	588	+	protein coding gene	predicted gene, 21586
Gm3883	4	42456965 to 42461867	4902	+	pseudogene	predicted gene 3883
Gm2163	4	42466752 to 42589938	123186	+	protein coding gene	predicted gene 2163
Fam205a2	4	42522580 to 42528175	5595	-	protein coding gene	family with sequence similarity 205, member A2
Gm10593	4	42552478 to 42587038	34560	+	antisense lncRNA gene	predicted gene 10593
Ccl19-ps2	4	42568087 to 42570083	1996	-	pseudogene	chemokine (C-C motif) ligand 19, pseudogene 2
Gm10591	4	42612195 to 42612860	665	+	protein coding gene	predicted gene 10591
Gm2564	4	42629756 to 42631714	1958	+	protein coding gene	predicted gene 2564
Ccl27b	4	42655251 to 42656005	754	+	protein coding gene	chemokine (C-C motif) ligand 27b
Il11ra2	4	42656355 to 42661893	5538	-	protein coding gene	interleukin 11 receptor, alpha chain 2
Gm42276	4	42665778 to 42668802	3024	-	lncRNA gene	predicted gene, 42276