MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:41017468-41087606

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Nfx1	4	40970906 to 41025992	55086	+	protein coding gene	nuclear transcription factor, X-box binding 1
Aqp7	4	41033074 to 41048139	15065	-	protein coding gene	aquaporin 7
Tssr41288	4	41033668 to 41033674	6	-	TSS region	transcription start site region 41288
Tssr41289	4	41045381 to 41045448	67	-	TSS region	transcription start site region 41289
Tssr36833	4	41045512 to 41045544	32	+	TSS region	transcription start site region 36833
Tssr41290	4	41047599 to 41047638	39	-	TSS region	transcription start site region 41290
Tssr41291	4	41047955 to 41047974	19	-	TSS region	transcription start site region 41291
Tssr41292	4	41047983 to 41047999	16	-	TSS region	transcription start site region 41292
Tssr41293	4	41048002 to 41048013	11	-	TSS region	transcription start site region 41293
Tssr41294	4	41048086 to 41048119	33	-	TSS region	transcription start site region 41294
Tssr41295	4	41048124 to 41048140	16	-	TSS region	transcription start site region 41295
Tssr41296	4	41048151 to 41048162	11	-	TSS region	transcription start site region 41296
Gm25637	4	41050220 to 41050326	106	+	snRNA gene	predicted gene, 25637
D4Mit212	4	41052468 to 41052606	138		DNA segment	DNA segment, Chr 4, Massachusetts Institute of Technology 212
Cpgi14148	4	41055114 to 41055339	225		CpG island	CpG island 14148
Tssr41297	4	41064397 to 41064425	28	-	TSS region	transcription start site region 41297
Tssr36834	4	41067845 to 41067853	8	+	TSS region	transcription start site region 36834
Cpgi14149	4	41075021 to 41075283	262		CpG island	CpG island 14149