Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:39485687-40245768

Filter by:
37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42271 4 39495705 to 39508994 13289 - lncRNA gene predicted gene, 42271
Gm42272 4 39708728 to 39712169 3441 - lncRNA gene predicted gene, 42272
Gm34007 4 39714710 to 39791320 76610 - lncRNA gene predicted gene, 34007
Tssr1138 4 39740758 to 39740759 1 + TSS region transcription start site region 1138
Gm12385 4 39767618 to 39768412 794 + pseudogene predicted gene 12385
Gm34071 4 39788744 to 39792398 3654 + lncRNA gene predicted gene, 34071
Gm12384 4 39823722 to 39824365 643 + pseudogene predicted gene 12384
Gm12386 4 39844187 to 39844874 687 - pseudogene predicted gene 12386
Gm22850 4 39865687 to 39865768 81 + snRNA gene predicted gene, 22850
Gm12387 4 39895208 to 39896162 954 - pseudogene predicted gene 12387
Gm34132 4 39936874 to 39952708 15834 - lncRNA gene predicted gene, 34132
Gm26087 4 39981497 to 39981558 61 - snRNA gene predicted gene, 26087
Tssr41234 4 40063792 to 40063811 19 - TSS region transcription start site region 41234
Gm12388 4 40069139 to 40070981 1842 + pseudogene predicted gene 12388
Gm12389 4 40116816 to 40117233 417 - pseudogene predicted gene 12389
Cpgi14134 4 40142842 to 40144030 1188 CpG island CpG island 14134
Tssr36790 4 40143080 to 40143107 27 + TSS region transcription start site region 36790
Aco1 4 40143081 to 40198338 55257 + protein coding gene aconitase 1
Tssr36791 4 40143368 to 40143444 76 + TSS region transcription start site region 36791
Tssr36792 4 40143460 to 40143502 42 + TSS region transcription start site region 36792
Tssr36793 4 40143510 to 40143521 11 + TSS region transcription start site region 36793
Tssr36794 4 40155821 to 40155831 10 + TSS region transcription start site region 36794
Tssr36795 4 40160048 to 40160050 2 + TSS region transcription start site region 36795
Tssr36796 4 40160296 to 40160301 5 + TSS region transcription start site region 36796
Tssr36797 4 40181979 to 40181994 15 + TSS region transcription start site region 36797
Tssr36798 4 40183572 to 40183592 20 + TSS region transcription start site region 36798
Tssr36799 4 40184932 to 40184944 12 + TSS region transcription start site region 36799
Tssr36800 4 40184950 to 40184989 39 + TSS region transcription start site region 36800
Tssr36801 4 40193740 to 40193745 5 + TSS region transcription start site region 36801
Ddx58 4 40203777 to 40239825 36048 - protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
Tssr41235 4 40210133 to 40210138 5 - TSS region transcription start site region 41235
Tssr41236 4 40214356 to 40214366 10 - TSS region transcription start site region 41236
Tssr41237 4 40220578 to 40220605 27 - TSS region transcription start site region 41237
Tssr41238 4 40234404 to 40234434 30 - TSS region transcription start site region 41238
Tssr41239 4 40239713 to 40239727 14 - TSS region transcription start site region 41239
Tssr41240 4 40239746 to 40239766 20 - TSS region transcription start site region 41240
Tssr41241 4 40239779 to 40239831 52 - TSS region transcription start site region 41241