Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Bdln6 | 4 | 164 | QTL | body length 6 | ||
Scon1 | 4 | 164 | QTL | sucrose consumption 1 | ||
Sluc18 | 4 | 164 | QTL | susceptibility to lung cancer 18 | ||
D4Mit4 | 4 | 164 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 4 | ||
D4Dcr34 | 4 | 110 | DNA segment | DNA Segment, Chr 4, Derry C. Roopenian 34 | ||
Gm42270 | 4 | 5417 | + | pseudogene | predicted gene, 42270 | |
Gm17094 | 4 | 20683 | - | antisense lncRNA gene | predicted gene 17094 | |
Tssr36788 | 4 | 46 | + | TSS region | transcription start site region 36788 | |
1700009N14Rik | 4 | 1481 | + | protein coding gene | RIKEN cDNA 1700009N14 gene | |
Tssr36789 | 4 | 15 | + | TSS region | transcription start site region 36789 | |
Habiir2 | 4 | 23913315 | QTL | hyperoxic acute lung injury imprinted region 2 | ||
vsd | 4 | 17317368 | heritable phenotypic marker | ventricular septal defect | ||
D4Mit196 | 4 | 186 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 196 | ||
D4Dcr35 | 4 | 110 | DNA segment | DNA Segment, Chr 4, Derry C. Roopenian 35 | ||
Gm42271 | 4 | 13289 | - | lncRNA gene | predicted gene, 42271 | |
Gm42272 | 4 | 3441 | - | lncRNA gene | predicted gene, 42272 | |
Gm34007 | 4 | 76610 | - | lncRNA gene | predicted gene, 34007 | |
Tssr1138 | 4 | 1 | + | TSS region | transcription start site region 1138 | |
Gm12385 | 4 | 794 | + | pseudogene | predicted gene 12385 | |
Gm34071 | 4 | 3654 | + | lncRNA gene | predicted gene, 34071 | |
Gm12384 | 4 | 643 | + | pseudogene | predicted gene 12384 | |
Gm12386 | 4 | 687 | - | pseudogene | predicted gene 12386 | |
Gm22850 | 4 | 81 | + | snRNA gene | predicted gene, 22850 | |
Gm12387 | 4 | 954 | - | pseudogene | predicted gene 12387 | |
Gm34132 | 4 | 15834 | - | lncRNA gene | predicted gene, 34132 | |
Gm26087 | 4 | 61 | - | snRNA gene | predicted gene, 26087 | |
Tssr41234 | 4 | 19 | - | TSS region | transcription start site region 41234 | |
Gm12388 | 4 | 1842 | + | pseudogene | predicted gene 12388 | |
Gm12389 | 4 | 417 | - | pseudogene | predicted gene 12389 | |
Cpgi14134 | 4 | 1188 | CpG island | CpG island 14134 | ||
Tssr36790 | 4 | 27 | + | TSS region | transcription start site region 36790 | |
Aco1 | 4 | 55257 | + | protein coding gene | aconitase 1 | |
Tssr36791 | 4 | 76 | + | TSS region | transcription start site region 36791 | |
Tssr36792 | 4 | 42 | + | TSS region | transcription start site region 36792 | |
Tssr36793 | 4 | 11 | + | TSS region | transcription start site region 36793 | |
Tssr36794 | 4 | 10 | + | TSS region | transcription start site region 36794 | |
Tssr36795 | 4 | 2 | + | TSS region | transcription start site region 36795 | |
Tssr36796 | 4 | 5 | + | TSS region | transcription start site region 36796 | |
Tssr36797 | 4 | 15 | + | TSS region | transcription start site region 36797 | |
Tssr36798 | 4 | 20 | + | TSS region | transcription start site region 36798 | |
Tssr36799 | 4 | 12 | + | TSS region | transcription start site region 36799 | |
Tssr36800 | 4 | 39 | + | TSS region | transcription start site region 36800 | |
Tssr36801 | 4 | 5 | + | TSS region | transcription start site region 36801 | |
Ddx58 | 4 | 36048 | - | protein coding gene | DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 | |
Tssr41235 | 4 | 5 | - | TSS region | transcription start site region 41235 | |
Tssr41236 | 4 | 10 | - | TSS region | transcription start site region 41236 | |
Tssr41237 | 4 | 27 | - | TSS region | transcription start site region 41237 | |
Tssr41238 | 4 | 30 | - | TSS region | transcription start site region 41238 | |
Tssr41239 | 4 | 14 | - | TSS region | transcription start site region 41239 | |
Tssr41240 | 4 | 20 | - | TSS region | transcription start site region 41240 | |
Tssr41241 | 4 | 52 | - | TSS region | transcription start site region 41241 | |
Topors | 4 | 10235 | - | protein coding gene | topoisomerase I binding, arginine/serine-rich | |
Tssr1139 | 4 | 3 | + | TSS region | transcription start site region 1139 | |
Tssr36802 | 4 | 16 | + | TSS region | transcription start site region 36802 | |
Tssr41242 | 4 | 11 | - | TSS region | transcription start site region 41242 | |
Cpgi14135 | 4 | 1049 | CpG island | CpG island 14135 | ||
Tssr41243 | 4 | 121 | - | TSS region | transcription start site region 41243 | |
Cpgi14136 | 4 | 648 | CpG island | CpG island 14136 | ||
Tssr36803 | 4 | 32 | + | TSS region | transcription start site region 36803 | |
Smim27 | 4 | 642 | + | protein coding gene | small integral membrane protein 27 | |
Tssr41244 | 4 | 71 | - | TSS region | transcription start site region 41244 | |
Tssr36804 | 4 | 24 | + | TSS region | transcription start site region 36804 | |
Tssr36805 | 4 | 41 | + | TSS region | transcription start site region 36805 | |
Ndufb6 | 4 | 8830 | - | protein coding gene | NADH:ubiquinone oxidoreductase subunit B6 | |
Cpgi14137 | 4 | 944 | CpG island | CpG island 14137 | ||
Tssr41245 | 4 | 41 | - | TSS region | transcription start site region 41245 | |
Tssr41246 | 4 | 45 | - | TSS region | transcription start site region 41246 | |
Cpgi14138 | 4 | 204 | CpG island | CpG island 14138 | ||
4930509K18Rik | 4 | 4487 | + | lincRNA gene | RIKEN cDNA 4930509K18 gene | |
Gm23338 | 4 | 94 | - | snoRNA gene | predicted gene, 23338 | |
Tmem215 | 4 | 3473 | + | protein coding gene | transmembrane protein 215 | |
Cpgi14139 | 4 | 854 | CpG island | CpG island 14139 | ||
Cpgi14140 | 4 | 373 | CpG island | CpG island 14140 | ||
4933428C19Rik | 4 | 42708 | - | lincRNA gene | RIKEN cDNA 4933428C19 gene | |
Gm46856 | 4 | 3417 | - | pseudogene | predicted gene, 46856 | |
Gm12391 | 4 | 446 | + | pseudogene | predicted gene 12391 | |
Aptx | 4 | 20812 | - | protein coding gene | aprataxin | |
Tssr41247 | 4 | 22 | - | TSS region | transcription start site region 41247 | |
Tssr41248 | 4 | 15 | - | TSS region | transcription start site region 41248 | |
Tssr41249 | 4 | 44 | - | TSS region | transcription start site region 41249 | |
Cpgi14141 | 4 | 505 | CpG island | CpG island 14141 | ||
Tssr41250 | 4 | 11 | - | TSS region | transcription start site region 41250 | |
Tssr1140 | 4 | 12 | - | TSS region | transcription start site region 1140 | |
Tssr41251 | 4 | 33 | - | TSS region | transcription start site region 41251 | |
Tssr41252 | 4 | 15 | - | TSS region | transcription start site region 41252 | |
Tssr41253 | 4 | 9 | - | TSS region | transcription start site region 41253 | |
Tssr36806 | 4 | 51 | + | TSS region | transcription start site region 36806 | |
Gm12390 | 4 | 396 | - | pseudogene | predicted gene 12390 | |
Tssr41254 | 4 | 2 | - | TSS region | transcription start site region 41254 | |
Gm6297 | 4 | 2244 | - | lincRNA gene | predicted gene 6297 | |
Tssr1141 | 4 | 35 | - | TSS region | transcription start site region 1141 | |
Tssr36807 | 4 | 9 | + | TSS region | transcription start site region 36807 | |
Tssr36808 | 4 | 9 | + | TSS region | transcription start site region 36808 | |
Cpgi14142 | 4 | 1289 | CpG island | CpG island 14142 | ||
Tssr41255 | 4 | 26 | - | TSS region | transcription start site region 41255 | |
Tssr36809 | 4 | 51 | + | TSS region | transcription start site region 36809 | |
Dnaja1 | 4 | 12497 | + | protein coding gene | DnaJ heat shock protein family (Hsp40) member A1 | |
Tssr36810 | 4 | 22 | + | TSS region | transcription start site region 36810 | |
Tssr36811 | 4 | 89 | + | TSS region | transcription start site region 36811 | |
Mir207 | 4 | 78 | + | miRNA gene | microRNA 207 | |
Tssr36812 | 4 | 14 | + | TSS region | transcription start site region 36812 | |
Tssr36813 | 4 | 20 | + | TSS region | transcription start site region 36813 | |
Tssr36814 | 4 | 6 | + | TSS region | transcription start site region 36814 | |
Tssr36815 | 4 | 4 | + | TSS region | transcription start site region 36815 | |
Tssr36816 | 4 | 3 | + | TSS region | transcription start site region 36816 | |
Tssr36817 | 4 | 26 | + | TSS region | transcription start site region 36817 | |
Smu1 | 4 | 21381 | - | protein coding gene | smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) | |
Cpgi14143 | 4 | 802 | CpG island | CpG island 14143 | ||
Tssr41256 | 4 | 3 | - | TSS region | transcription start site region 41256 | |
Tssr41257 | 4 | 67 | - | TSS region | transcription start site region 41257 | |
Tssr1142 | 4 | 10 | - | TSS region | transcription start site region 1142 | |
Tssr1143 | 4 | 7 | - | TSS region | transcription start site region 1143 | |
Tssr36818 | 4 | 2 | + | TSS region | transcription start site region 36818 | |
D4Mit319 | 4 | 123 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 319 | ||
Gm34213 | 4 | 3800 | + | lncRNA gene | predicted gene, 34213 | |
Gm12396 | 4 | 305 | - | pseudogene | predicted gene 12396 | |
Tssr41258 | 4 | 4 | - | TSS region | transcription start site region 41258 | |
Tssr41259 | 4 | 11 | - | TSS region | transcription start site region 41259 | |
Tssr41260 | 4 | 22 | - | TSS region | transcription start site region 41260 | |
B4galt1 | 4 | 49403 | - | protein coding gene | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 | |
Tssr41261 | 4 | 4 | - | TSS region | transcription start site region 41261 | |
Tssr41262 | 4 | 17 | - | TSS region | transcription start site region 41262 | |
Tssr41263 | 4 | 15 | - | TSS region | transcription start site region 41263 | |
Tssr41264 | 4 | 25 | - | TSS region | transcription start site region 41264 | |
Tssr41265 | 4 | 18 | - | TSS region | transcription start site region 41265 | |
Tssr41266 | 4 | 20 | - | TSS region | transcription start site region 41266 | |
Tssr41267 | 4 | 13 | - | TSS region | transcription start site region 41267 | |
Tssr41268 | 4 | 10 | - | TSS region | transcription start site region 41268 | |
Tssr36819 | 4 | 3 | + | TSS region | transcription start site region 36819 | |
Tssr41269 | 4 | 31 | - | TSS region | transcription start site region 41269 | |
Mir5123 | 4 | 82 | - | miRNA gene | microRNA 5123 | |
Gm24112 | 4 | 82 | - | miRNA gene | predicted gene, 24112 | |
Gm25931 | 4 | 82 | - | miRNA gene | predicted gene, 25931 | |
Tssr41270 | 4 | 15 | - | TSS region | transcription start site region 41270 | |
Tssr41271 | 4 | 5 | - | TSS region | transcription start site region 41271 | |
Cpgi14144 | 4 | 1448 | CpG island | CpG island 14144 | ||
Tssr36820 | 4 | 23 | + | TSS region | transcription start site region 36820 | |
Tssr36821 | 4 | 9 | + | TSS region | transcription start site region 36821 | |
Tssr41272 | 4 | 23 | - | TSS region | transcription start site region 41272 | |
Tssr41273 | 4 | 24 | - | TSS region | transcription start site region 41273 | |
Tssr41274 | 4 | 14 | - | TSS region | transcription start site region 41274 | |
Tssr41275 | 4 | 71 | - | TSS region | transcription start site region 41275 | |
Tssr41276 | 4 | 17 | - | TSS region | transcription start site region 41276 | |
Tssr41277 | 4 | 45 | - | TSS region | transcription start site region 41277 | |
Gm34289 | 4 | 27952 | + | lncRNA gene | predicted gene, 34289 | |
Cpgi14145 | 4 | 379 | CpG island | CpG island 14145 | ||
Tssr36822 | 4 | 15 | + | TSS region | transcription start site region 36822 | |
Tssr41278 | 4 | 14 | - | TSS region | transcription start site region 41278 | |
Tssr36823 | 4 | 13 | + | TSS region | transcription start site region 36823 | |
Tssr41279 | 4 | 28 | - | TSS region | transcription start site region 41279 | |
Tssr36824 | 4 | 3 | + | TSS region | transcription start site region 36824 | |
Tssr41280 | 4 | 8 | - | TSS region | transcription start site region 41280 | |
Gm12397 | 4 | 614 | - | pseudogene | predicted gene 12397 | |
Tssr36825 | 4 | 16 | + | TSS region | transcription start site region 36825 | |
Spink4 | 4 | 11339 | + | protein coding gene | serine peptidase inhibitor, Kazal type 4 | |
Tssr41281 | 4 | 28 | - | TSS region | transcription start site region 41281 | |
Bag1 | 4 | 11896 | - | protein coding gene | BCL2-associated athanogene 1 | |
D4Mit195 | 4 | 103 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 195 | ||
Tssr41282 | 4 | 12 | - | TSS region | transcription start site region 41282 | |
Cpgi14146 | 4 | 1272 | CpG island | CpG island 14146 | ||
Tssr41283 | 4 | 11 | - | TSS region | transcription start site region 41283 | |
Tssr41284 | 4 | 19 | - | TSS region | transcription start site region 41284 | |
Tssr41285 | 4 | 11 | - | TSS region | transcription start site region 41285 | |
Tssr41286 | 4 | 100 | - | TSS region | transcription start site region 41286 | |
Tssr41287 | 4 | 17 | - | TSS region | transcription start site region 41287 | |
Tssr36826 | 4 | 11 | + | TSS region | transcription start site region 36826 | |
Tssr36827 | 4 | 11 | + | TSS region | transcription start site region 36827 | |
Tssr36828 | 4 | 9 | + | TSS region | transcription start site region 36828 | |
Tssr36829 | 4 | 54 | + | TSS region | transcription start site region 36829 | |
Chmp5 | 4 | 16749 | + | protein coding gene | charged multivesicular body protein 5 | |
Tssr36830 | 4 | 17 | + | TSS region | transcription start site region 36830 | |
Cpgi14147 | 4 | 1001 | CpG island | CpG island 14147 | ||
Nfx1 | 4 | 55086 | + | protein coding gene | nuclear transcription factor, X-box binding 1 | |
Tssr36831 | 4 | 72 | + | TSS region | transcription start site region 36831 | |
Mir3094 | 4 | 63 | + | miRNA gene | microRNA 3094 | |
Tssr36832 | 4 | 4 | + | TSS region | transcription start site region 36832 | |
Aqp7 | 4 | 15065 | - | protein coding gene | aquaporin 7 | |
Tssr41288 | 4 | 6 | - | TSS region | transcription start site region 41288 | |
Tssr41289 | 4 | 67 | - | TSS region | transcription start site region 41289 | |
Tssr36833 | 4 | 32 | + | TSS region | transcription start site region 36833 | |
Tssr41290 | 4 | 39 | - | TSS region | transcription start site region 41290 | |
Tssr41291 | 4 | 19 | - | TSS region | transcription start site region 41291 | |
Tssr41292 | 4 | 16 | - | TSS region | transcription start site region 41292 | |
Tssr41293 | 4 | 11 | - | TSS region | transcription start site region 41293 | |
Tssr41294 | 4 | 33 | - | TSS region | transcription start site region 41294 | |
Tssr41295 | 4 | 16 | - | TSS region | transcription start site region 41295 | |
Tssr41296 | 4 | 11 | - | TSS region | transcription start site region 41296 | |
Gm25637 | 4 | 106 | + | snRNA gene | predicted gene, 25637 | |
D4Mit212 | 4 | 138 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 212 | ||
Cpgi14148 | 4 | 225 | CpG island | CpG island 14148 | ||
Tssr41297 | 4 | 28 | - | TSS region | transcription start site region 41297 | |
Tssr36834 | 4 | 8 | + | TSS region | transcription start site region 36834 | |
Cpgi14149 | 4 | 262 | CpG island | CpG island 14149 | ||
Aqp3 | 4 | 5459 | - | protein coding gene | aquaporin 3 | |
Tssr41298 | 4 | 12 | - | TSS region | transcription start site region 41298 | |
Tssr41299 | 4 | 17 | - | TSS region | transcription start site region 41299 | |
Tssr41300 | 4 | 12 | - | TSS region | transcription start site region 41300 | |
Tssr41301 | 4 | 12 | - | TSS region | transcription start site region 41301 | |
Tssr41302 | 4 | 11 | - | TSS region | transcription start site region 41302 | |
Tssr41303 | 4 | 21 | - | TSS region | transcription start site region 41303 |