Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:3880942-4134663

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr40814 4 3899011 to 3899015 4 - TSS region transcription start site region 40814
Plag1 4 3900996 to 3938423 37427 - protein coding gene pleiomorphic adenoma gene 1
Tssr40815 4 3903327 to 3903328 1 - TSS region transcription start site region 40815
Cpgi13995 4 3937520 to 3939405 1885 CpG island CpG island 13995
Tssr40816 4 3938354 to 3938401 47 - TSS region transcription start site region 40816
Chchd7 4 3938888 to 3951046 12158 + protein coding gene coiled-coil-helix-coiled-coil-helix domain containing 7
Tssr36368 4 3938893 to 3938898 5 + TSS region transcription start site region 36368
Tssr36369 4 3938904 to 3938932 28 + TSS region transcription start site region 36369
Tssr36370 4 3939381 to 3939421 40 + TSS region transcription start site region 36370
Tssr36371 4 3940747 to 3940751 4 + TSS region transcription start site region 36371
Gm19037 4 3961244 to 3962346 1102 + pseudogene predicted gene, 19037
Gm11808 4 3973117 to 3973595 478 - protein coding gene predicted gene 11808
Tssr40817 4 3973595 to 3973607 12 - TSS region transcription start site region 40817
Rps10-ps3 4 3978251 to 3978750 499 - pseudogene ribosomal protein S10, pseudogene 3
Sdr16c5 4 3995942 to 4019663 23721 - protein coding gene short chain dehydrogenase/reductase family 16C, member 5
Tssr40818 4 4016472 to 4016482 10 - TSS region transcription start site region 40818
Tssr40819 4 4016484 to 4016497 13 - TSS region transcription start site region 40819
Tssr40820 4 4016524 to 4016539 15 - TSS region transcription start site region 40820
Tssr40821 4 4019488 to 4019499 11 - TSS region transcription start site region 40821
Tssr40822 4 4019508 to 4019562 54 - TSS region transcription start site region 40822
Tssr40823 4 4019566 to 4019576 10 - TSS region transcription start site region 40823
Tssr40824 4 4019628 to 4019659 31 - TSS region transcription start site region 40824
Tssr40825 4 4019668 to 4019675 7 - TSS region transcription start site region 40825
Sdr16c6 4 4055926 to 4077514 21588 - protein coding gene short chain dehydrogenase/reductase family 16C, member 6
Tssr40826 4 4077510 to 4077540 30 - TSS region transcription start site region 40826
Tssr40827 4 4112256 to 4112279 23 - TSS region transcription start site region 40827
Penk 4 4133531 to 4138819 5288 - protein coding gene preproenkephalin
Tssr40828 4 4133805 to 4133822 17 - TSS region transcription start site region 40828
Tssr40829 4 4133842 to 4133856 14 - TSS region transcription start site region 40829
Tssr40830 4 4134195 to 4134210 15 - TSS region transcription start site region 40830