MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:3872520-4004405

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi13994	4	3874813 to 3875398	585		CpG island	CpG island 13994
Tssr40812	4	3875168 to 3875179	11	-	TSS region	transcription start site region 40812
Tssr40813	4	3875202 to 3875270	68	-	TSS region	transcription start site region 40813
Tssr40814	4	3899011 to 3899015	4	-	TSS region	transcription start site region 40814
Plag1	4	3900996 to 3938423	37427	-	protein coding gene	pleiomorphic adenoma gene 1
Tssr40815	4	3903327 to 3903328	1	-	TSS region	transcription start site region 40815
Cpgi13995	4	3937520 to 3939405	1885		CpG island	CpG island 13995
Tssr40816	4	3938354 to 3938401	47	-	TSS region	transcription start site region 40816
Chchd7	4	3938888 to 3951046	12158	+	protein coding gene	coiled-coil-helix-coiled-coil-helix domain containing 7
Tssr36368	4	3938893 to 3938898	5	+	TSS region	transcription start site region 36368
Tssr36369	4	3938904 to 3938932	28	+	TSS region	transcription start site region 36369
Tssr36370	4	3939381 to 3939421	40	+	TSS region	transcription start site region 36370
Tssr36371	4	3940747 to 3940751	4	+	TSS region	transcription start site region 36371
Gm19037	4	3961244 to 3962346	1102	+	pseudogene	predicted gene, 19037
Gm11808	4	3973117 to 3973595	478	-	protein coding gene	predicted gene 11808
Tssr40817	4	3973595 to 3973607	12	-	TSS region	transcription start site region 40817
Rps10-ps3	4	3978251 to 3978750	499	-	pseudogene	ribosomal protein S10, pseudogene 3
Sdr16c5	4	3995942 to 4019663	23721	-	protein coding gene	short chain dehydrogenase/reductase family 16C, member 5