Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:35361165-37281170

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Flal3 4 35000000 to 37000000 2000000 QTL fatty liver accumulation QTL 3, females only
Gm12368 4 35401058 to 35401491 433 + pseudogene predicted gene 12368
Gm12365 4 35436214 to 35436781 567 + pseudogene predicted gene 12365
Lingo2 4 35706647 to 36951747 1245100 - protein coding gene leucine rich repeat and Ig domain containing 2
Cpgi14131 4 35708377 to 35708724 347 CpG island CpG island 14131
Tssr41222 4 35795200 to 35795204 4 - TSS region transcription start site region 41222
Gm12369 4 36003241 to 36004146 905 - pseudogene predicted gene 12369
Tssr41223 4 36006004 to 36006007 3 - TSS region transcription start site region 41223
A330107A15Rik 4 36154093 to 36154583 490 unclassified gene RIKEN cDNA A330107A15 gene
Tssr41224 4 36321165 to 36321170 5 - TSS region transcription start site region 41224
Gm12370 4 36444308 to 36444884 576 + pseudogene predicted gene 12370
Mir876 4 36645373 to 36645453 80 - miRNA gene microRNA 876
Tssr41225 4 36654162 to 36654165 3 - TSS region transcription start site region 41225
Tssr41226 4 36664950 to 36664953 3 - TSS region transcription start site region 41226
Mir873a 4 36668510 to 36668586 76 - miRNA gene microRNA 873a
Mir873b 4 36668510 to 36668586 76 + miRNA gene microRNA 873b
Gm23314 4 36756048 to 36756154 106 + snRNA gene predicted gene, 23314
D4Mit194 4 36819216 to 36819361 145 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 194
Tssr41227 4 36856502 to 36856506 4 - TSS region transcription start site region 41227
Tssr41228 4 36936311 to 36936315 4 - TSS region transcription start site region 41228
Cpgi14132 4 36950226 to 36950957 731 CpG island CpG island 14132
Cpgi14133 4 36951146 to 36952100 954 CpG island CpG island 14133
Tssr41229 4 36951689 to 36951759 70 - TSS region transcription start site region 41229
Tssr36785 4 36952930 to 36952970 40 + TSS region transcription start site region 36785
Gm12371 4 36952966 to 36988032 35066 + lincRNA gene predicted gene 12371
Gm42269 4 37086049 to 37099185 13136 + lncRNA gene predicted gene, 42269
Gm12372 4 37139107 to 37139874 767 - pseudogene predicted gene 12372
D4Mit107 4 37171886 to 37172023 137 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 107
Rpl23a-ps6 4 37238708 to 37239175 467 - pseudogene ribosomal protein 23A, pseudogene 6