Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:3435081-3676224

Filter by:
28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr40804 4 3454356 to 3454361 5 - TSS region transcription start site region 40804
Gm11785 4 3455702 to 3456302 600 + pseudogene predicted gene 11785
Gm11787 4 3496713 to 3511963 15250 - pseudogene predicted gene 11787
Mir3471-2 4 3537090 to 3537191 101 + miRNA gene microRNA 3471-2
Tmem68 4 3549041 to 3574848 25807 - protein coding gene transmembrane protein 68
B230117O15Rik 4 3555081 to 3556224 1143 unclassified gene RIKEN cDNA B230117O15 gene
Cpgi13990 4 3574525 to 3575167 642 CpG island CpG island 13990
Tssr40805 4 3574762 to 3574774 12 - TSS region transcription start site region 40805
Tssr40806 4 3574776 to 3574821 45 - TSS region transcription start site region 40806
Tssr40807 4 3574822 to 3574840 18 - TSS region transcription start site region 40807
Tssr40808 4 3574844 to 3574850 6 - TSS region transcription start site region 40808
Tssr36327 4 3574855 to 3574871 16 + TSS region transcription start site region 36327
Tssr36328 4 3574872 to 3574913 41 + TSS region transcription start site region 36328
Tgs1 4 3574875 to 3616619 41744 + protein coding gene trimethylguanosine synthase 1
Tssr36329 4 3574917 to 3574933 16 + TSS region transcription start site region 36329
Tssr36330 4 3574937 to 3574955 18 + TSS region transcription start site region 36330
Tssr36331 4 3574958 to 3574970 12 + TSS region transcription start site region 36331
Tssr36332 4 3574984 to 3574993 9 + TSS region transcription start site region 36332
Tssr40809 4 3575125 to 3575142 17 - TSS region transcription start site region 40809
Gm22541 4 3619189 to 3619315 126 + snoRNA gene predicted gene, 22541
Tssr36333 4 3649251 to 3649259 8 + TSS region transcription start site region 36333
Tssr36334 4 3656508 to 3656518 10 + TSS region transcription start site region 36334
2210414B05Rik 4 3656508 to 3663108 6600 + lincRNA gene RIKEN cDNA 2210414B05 gene
Lmr9b 4 3657124 to 3657234 110 QTL leishmaniasis resistance 9b
Lmr9a 4 3657124 to 3657234 110 QTL leishmaniasis resistance 9
Lmr9 4 3657124 to 3657234 110 QTL leishmaniasis resistance 9
D4Mit149 4 3657124 to 3657234 110 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 149
Gm42250 4 3659570 to 3678048 18478 - lncRNA gene predicted gene, 42250