Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:32534899-33065587

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bach2 4 32238804 to 32586108 347304 + protein coding gene BTB and CNC homology, basic leucine zipper transcription factor 2
Bach2os 4 32559680 to 32571662 11982 - antisense lncRNA gene BTB and CNC homology 2, opposite strand
Tssr41160 4 32571663 to 32571686 23 - TSS region transcription start site region 41160
Gja10 4 32600865 to 32602382 1517 - protein coding gene gap junction protein, alpha 10
Gm11933 4 32611351 to 32611725 374 + pseudogene predicted gene 11933
Cpgi14102 4 32614985 to 32616015 1030 CpG island CpG island 14102
Tssr36707 4 32615428 to 32615468 40 + TSS region transcription start site region 36707
Casp8ap2 4 32615470 to 32653271 37801 + protein coding gene caspase 8 associated protein 2
Tssr36708 4 32615477 to 32615487 10 + TSS region transcription start site region 36708
Tssr36709 4 32615489 to 32615505 16 + TSS region transcription start site region 36709
A130074J08Rik 4 32617499 to 32620659 3160 unclassified gene RIKEN cDNA A130074J08 gene
Tssr36710 4 32623985 to 32623989 4 + TSS region transcription start site region 36710
Tssr36711 4 32626872 to 32626891 19 + TSS region transcription start site region 36711
Tssr1131 4 32652768 to 32652785 17 + TSS region transcription start site region 1131
Gm11936 4 32655929 to 32656088 159 - pseudogene predicted gene 11936
Cpgi14103 4 32656706 to 32657622 916 CpG island CpG island 14103
Tssr36712 4 32657107 to 32657166 59 + TSS region transcription start site region 36712
Mdn1 4 32657119 to 32775217 118098 + protein coding gene midasin AAA ATPase 1
Tssr36713 4 32657184 to 32657194 10 + TSS region transcription start site region 36713
Tssr36714 4 32672547 to 32672559 12 + TSS region transcription start site region 36714
Tssr36715 4 32723003 to 32723016 13 + TSS region transcription start site region 36715
Tssr36716 4 32723042 to 32723051 9 + TSS region transcription start site region 36716
Tssr36717 4 32733113 to 32733118 5 + TSS region transcription start site region 36717
Tssr36718 4 32750691 to 32750695 4 + TSS region transcription start site region 36718
Tssr36719 4 32754429 to 32754442 13 + TSS region transcription start site region 36719
Tssr36720 4 32759111 to 32759123 12 + TSS region transcription start site region 36720
Tssr36721 4 32768331 to 32768345 14 + TSS region transcription start site region 36721
Gm42267 4 32791267 to 32792684 1417 - protein coding gene predicted gene, 42267
Cpgi14104 4 32799899 to 32800587 688 CpG island CpG island 14104
Tssr36722 4 32800246 to 32800289 43 + TSS region transcription start site region 36722
Lyrm2 4 32800253 to 32801559 1306 + protein coding gene LYR motif containing 2
Ankrd6 4 32804035 to 32950841 146806 - protein coding gene ankyrin repeat domain 6
Cpgi14105 4 32864134 to 32864583 449 CpG island CpG island 14105
Tssr41161 4 32864600 to 32864616 16 - TSS region transcription start site region 41161
Gm11941 4 32892686 to 32893295 609 + pseudogene predicted gene 11941
Tssr41162 4 32923390 to 32923436 46 - TSS region transcription start site region 41162
Tssr41163 4 32923517 to 32923530 13 - TSS region transcription start site region 41163
Cpgi14106 4 32950353 to 32951364 1011 CpG island CpG island 14106
Tssr41164 4 32950813 to 32950866 53 - TSS region transcription start site region 41164
Cpgi14107 4 32951639 to 32951930 291 CpG island CpG island 14107
Cpgi14108 4 32964736 to 32964962 226 CpG island CpG island 14108
Tssr36723 4 32964767 to 32964818 51 + TSS region transcription start site region 36723
Gm11942 4 32964888 to 32965232 344 + pseudogene predicted gene 11942
Cpgi14109 4 32982833 to 32984078 1245 CpG island CpG island 14109
Tssr36724 4 32982983 to 32983003 20 + TSS region transcription start site region 36724
Tssr36725 4 32983008 to 32983039 31 + TSS region transcription start site region 36725
Rragd 4 32983037 to 33022180 39143 + protein coding gene Ras-related GTP binding D
Tssr36726 4 32983283 to 32983308 25 + TSS region transcription start site region 36726
Tssr36727 4 32983311 to 32983339 28 + TSS region transcription start site region 36727
Tssr36728 4 32983359 to 32983400 41 + TSS region transcription start site region 36728
Tssr36729 4 32983417 to 32983428 11 + TSS region transcription start site region 36729
Tssr36730 4 32983494 to 32983503 9 + TSS region transcription start site region 36730
Tssr36731 4 32983523 to 32983534 11 + TSS region transcription start site region 36731
Tssr41165 4 32987062 to 32987103 41 - TSS region transcription start site region 41165
Gm11943 4 33001995 to 33002321 326 - pseudogene predicted gene 11943
4933421O10Rik 4 33027142 to 33031323 4181 - lncRNA gene RIKEN cDNA 4933421O10 gene
Cpgi14110 4 33030637 to 33032027 1390 CpG island CpG island 14110
Tssr41166 4 33031254 to 33031272 18 - TSS region transcription start site region 41166
Tssr41167 4 33031282 to 33031294 12 - TSS region transcription start site region 41167
Tssr41168 4 33031295 to 33031354 59 - TSS region transcription start site region 41168
Tssr36732 4 33031371 to 33031524 153 + TSS region transcription start site region 36732
Ube2j1 4 33031416 to 33052363 20947 + protein coding gene ubiquitin-conjugating enzyme E2J 1
Tssr36733 4 33031527 to 33031556 29 + TSS region transcription start site region 36733
Tssr36734 4 33031724 to 33031740 16 + TSS region transcription start site region 36734
Tssr36735 4 33031748 to 33031765 17 + TSS region transcription start site region 36735
Tssr36736 4 33045174 to 33045188 14 + TSS region transcription start site region 36736
Gm11931 4 33053838 to 33054284 446 - pseudogene predicted gene 11931
Tssr36737 4 33056339 to 33056340 1 + TSS region transcription start site region 36737
Gabrr2 4 33062999 to 33095865 32866 + protein coding gene gamma-aminobutyric acid (GABA) C receptor, subunit rho 2
Tssr36738 4 33063278 to 33063297 19 + TSS region transcription start site region 36738