Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:32260428-32970468

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bach2 4 32238804 to 32586108 347304 + protein coding gene BTB and CNC homology, basic leucine zipper transcription factor 2
Bach2it1 4 32251761 to 32265835 14074 + sense intronic lncRNA gene BTB and CNC homology 2, intronic transcript 1
Tssr41146 4 32263147 to 32263162 15 - TSS region transcription start site region 41146
Tssr36685 4 32263880 to 32263893 13 + TSS region transcription start site region 36685
Tssr41147 4 32268069 to 32268107 38 - TSS region transcription start site region 41147
Tssr36686 4 32268318 to 32268348 30 + TSS region transcription start site region 36686
Tssr41148 4 32280692 to 32280706 14 - TSS region transcription start site region 41148
D4Mit267 4 32282644 to 32282758 114 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 267
Tssr41149 4 32291457 to 32291470 13 - TSS region transcription start site region 41149
Tssr36687 4 32291705 to 32291710 5 + TSS region transcription start site region 36687
Tssr36688 4 32291773 to 32291782 9 + TSS region transcription start site region 36688
Tssr36689 4 32291783 to 32291799 16 + TSS region transcription start site region 36689
Tssr36690 4 32313075 to 32313082 7 + TSS region transcription start site region 36690
Tssr41150 4 32335639 to 32335646 7 - TSS region transcription start site region 41150
Tssr36691 4 32335932 to 32335935 3 + TSS region transcription start site region 36691
Tssr36692 4 32335944 to 32335960 16 + TSS region transcription start site region 36692
Tssr36693 4 32335963 to 32335974 11 + TSS region transcription start site region 36693
Tssr36694 4 32336028 to 32336035 7 + TSS region transcription start site region 36694
Tssr36695 4 32336039 to 32336046 7 + TSS region transcription start site region 36695
Tssr41151 4 32343746 to 32343755 9 - TSS region transcription start site region 41151
Tssr41152 4 32343817 to 32343829 12 - TSS region transcription start site region 41152
Tssr41153 4 32351431 to 32351440 9 - TSS region transcription start site region 41153
Tssr36696 4 32353385 to 32353423 38 + TSS region transcription start site region 36696
Tssr41154 4 32363435 to 32363446 11 - TSS region transcription start site region 41154
Tssr36697 4 32363934 to 32363942 8 + TSS region transcription start site region 36697
Tssr36698 4 32363944 to 32363954 10 + TSS region transcription start site region 36698
Tssr41155 4 32375158 to 32375166 8 - TSS region transcription start site region 41155
Tssr41156 4 32375202 to 32375213 11 - TSS region transcription start site region 41156
Tssr36699 4 32376259 to 32376283 24 + TSS region transcription start site region 36699
Tssr41157 4 32406080 to 32406083 3 - TSS region transcription start site region 41157
Tssr36700 4 32415578 to 32415582 4 + TSS region transcription start site region 36700
Tssr36701 4 32424736 to 32424747 11 + TSS region transcription start site region 36701
Tssr36702 4 32424753 to 32424774 21 + TSS region transcription start site region 36702
Tssr41158 4 32425184 to 32425195 11 - TSS region transcription start site region 41158
Tssr36703 4 32425229 to 32425239 10 + TSS region transcription start site region 36703
Tssr36704 4 32426686 to 32426699 13 + TSS region transcription start site region 36704
Tssr41159 4 32442008 to 32442010 2 - TSS region transcription start site region 41159
Tssr36705 4 32445528 to 32445533 5 + TSS region transcription start site region 36705
Cpgi14101 4 32481377 to 32481636 259 CpG island CpG island 14101
Gm24371 4 32514787 to 32515053 266 + unclassified non-coding RNA gene predicted gene, 24371
Tssr36706 4 32527090 to 32527113 23 + TSS region transcription start site region 36706
Bach2os 4 32559680 to 32571662 11982 - antisense lncRNA gene BTB and CNC homology 2, opposite strand
Tssr41160 4 32571663 to 32571686 23 - TSS region transcription start site region 41160
Gja10 4 32600865 to 32602382 1517 - protein coding gene gap junction protein, alpha 10
Gm11933 4 32611351 to 32611725 374 + pseudogene predicted gene 11933
Cpgi14102 4 32614985 to 32616015 1030 CpG island CpG island 14102
Tssr36707 4 32615428 to 32615468 40 + TSS region transcription start site region 36707
Casp8ap2 4 32615470 to 32653271 37801 + protein coding gene caspase 8 associated protein 2
Tssr36708 4 32615477 to 32615487 10 + TSS region transcription start site region 36708
Tssr36709 4 32615489 to 32615505 16 + TSS region transcription start site region 36709
A130074J08Rik 4 32617499 to 32620659 3160 unclassified gene RIKEN cDNA A130074J08 gene
Tssr36710 4 32623985 to 32623989 4 + TSS region transcription start site region 36710
Tssr36711 4 32626872 to 32626891 19 + TSS region transcription start site region 36711
Tssr1131 4 32652768 to 32652785 17 + TSS region transcription start site region 1131
Gm11936 4 32655929 to 32656088 159 - pseudogene predicted gene 11936
Cpgi14103 4 32656706 to 32657622 916 CpG island CpG island 14103
Tssr36712 4 32657107 to 32657166 59 + TSS region transcription start site region 36712
Mdn1 4 32657119 to 32775217 118098 + protein coding gene midasin AAA ATPase 1
Tssr36713 4 32657184 to 32657194 10 + TSS region transcription start site region 36713
Tssr36714 4 32672547 to 32672559 12 + TSS region transcription start site region 36714
Tssr36715 4 32723003 to 32723016 13 + TSS region transcription start site region 36715
Tssr36716 4 32723042 to 32723051 9 + TSS region transcription start site region 36716
Tssr36717 4 32733113 to 32733118 5 + TSS region transcription start site region 36717
Tssr36718 4 32750691 to 32750695 4 + TSS region transcription start site region 36718
Tssr36719 4 32754429 to 32754442 13 + TSS region transcription start site region 36719
Tssr36720 4 32759111 to 32759123 12 + TSS region transcription start site region 36720
Tssr36721 4 32768331 to 32768345 14 + TSS region transcription start site region 36721
Gm42267 4 32791267 to 32792684 1417 - protein coding gene predicted gene, 42267
Cpgi14104 4 32799899 to 32800587 688 CpG island CpG island 14104
Tssr36722 4 32800246 to 32800289 43 + TSS region transcription start site region 36722
Lyrm2 4 32800253 to 32801559 1306 + protein coding gene LYR motif containing 2
Ankrd6 4 32804035 to 32950841 146806 - protein coding gene ankyrin repeat domain 6
Cpgi14105 4 32864134 to 32864583 449 CpG island CpG island 14105
Tssr41161 4 32864600 to 32864616 16 - TSS region transcription start site region 41161
Gm11941 4 32892686 to 32893295 609 + pseudogene predicted gene 11941
Tssr41162 4 32923390 to 32923436 46 - TSS region transcription start site region 41162
Tssr41163 4 32923517 to 32923530 13 - TSS region transcription start site region 41163
Cpgi14106 4 32950353 to 32951364 1011 CpG island CpG island 14106
Tssr41164 4 32950813 to 32950866 53 - TSS region transcription start site region 41164
Cpgi14107 4 32951639 to 32951930 291 CpG island CpG island 14107
Cpgi14108 4 32964736 to 32964962 226 CpG island CpG island 14108
Tssr36723 4 32964767 to 32964818 51 + TSS region transcription start site region 36723
Gm11942 4 32964888 to 32965232 344 + pseudogene predicted gene 11942