Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:31655541-32285548

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm32412 4 31822055 to 31831914 9859 - lncRNA gene predicted gene, 32412
Tssr41129 4 31877530 to 31877542 12 - TSS region transcription start site region 41129
Cpgi14097 4 31937539 to 31937973 434 CpG island CpG island 14097
2610008G14Rik 4 31962558 to 31963811 1253 unclassified gene RIKEN cDNA 2610008G14 gene
Cpgi14098 4 31963319 to 31964738 1419 CpG island CpG island 14098
Tssr36658 4 31963922 to 31963980 58 + TSS region transcription start site region 36658
Tssr36659 4 31964081 to 31964160 79 + TSS region transcription start site region 36659
Map3k7 4 31964097 to 32023467 59370 + protein coding gene mitogen-activated protein kinase kinase kinase 7
Tssr41130 4 31970541 to 31970548 7 - TSS region transcription start site region 41130
Tssr41131 4 31970560 to 31970571 11 - TSS region transcription start site region 41131
Tssr41132 4 31970576 to 31970583 7 - TSS region transcription start site region 41132
Gm11926 4 31990857 to 31991286 429 - pseudogene predicted gene 11926
Gm26254 4 31998624 to 31998741 117 - snRNA gene predicted gene, 26254
Tssr41133 4 31998738 to 31998742 4 - TSS region transcription start site region 41133
9530004M16Rik 4 32007988 to 32009135 1147 unclassified gene RIKEN cDNA 9530004M16 gene
Tssr36660 4 32015510 to 32015521 11 + TSS region transcription start site region 36660
Tssr36661 4 32015543 to 32015552 9 + TSS region transcription start site region 36661
Tssr36662 4 32051710 to 32051731 21 + TSS region transcription start site region 36662
Gm11927 4 32051738 to 32052914 1176 + pseudogene predicted gene 11927
Cpgi14099 4 32095365 to 32095606 241 CpG island CpG island 14099
Tssr36663 4 32149458 to 32149486 28 + TSS region transcription start site region 36663
Gm11928 4 32149786 to 32150222 436 + pseudogene predicted gene 11928
Gm42266 4 32160976 to 32186820 25844 - lncRNA gene predicted gene, 42266
Tssr36664 4 32165113 to 32165130 17 + TSS region transcription start site region 36664
Tssr36665 4 32165150 to 32165161 11 + TSS region transcription start site region 36665
Tssr41134 4 32167283 to 32167305 22 - TSS region transcription start site region 41134
D4Mit193 4 32167964 to 32168099 135 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 193
D4Mit95 4 32176186 to 32176355 169 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 95
Gm11929 4 32207148 to 32208092 944 + pseudogene predicted gene 11929
Tssr36666 4 32220136 to 32220140 4 + TSS region transcription start site region 36666
n-TGccc3 4 32230250 to 32230320 70 + tRNA gene nuclear encoded tRNA glycine 3 (anticodon CCC)
Cpgi14100 4 32238159 to 32240358 2199 CpG island CpG island 14100
Tssr36667 4 32238470 to 32238493 23 + TSS region transcription start site region 36667
Tssr36668 4 32238713 to 32238802 89 + TSS region transcription start site region 36668
Bach2 4 32238804 to 32586108 347304 + protein coding gene BTB and CNC homology, basic leucine zipper transcription factor 2
Tssr36669 4 32238883 to 32238890 7 + TSS region transcription start site region 36669
Tssr36670 4 32238935 to 32238946 11 + TSS region transcription start site region 36670
Tssr36671 4 32238953 to 32238964 11 + TSS region transcription start site region 36671
Tssr36672 4 32238980 to 32238996 16 + TSS region transcription start site region 36672
Tssr41135 4 32239332 to 32239348 16 - TSS region transcription start site region 41135
Tssr36673 4 32239423 to 32239443 20 + TSS region transcription start site region 36673
Tssr36674 4 32239449 to 32239470 21 + TSS region transcription start site region 36674
Tssr41136 4 32239953 to 32239964 11 - TSS region transcription start site region 41136
Tssr41137 4 32239992 to 32239998 6 - TSS region transcription start site region 41137
Tssr36675 4 32240470 to 32240474 4 + TSS region transcription start site region 36675
Tssr41138 4 32241242 to 32241253 11 - TSS region transcription start site region 41138
Tssr36676 4 32247757 to 32247764 7 + TSS region transcription start site region 36676
Tssr41139 4 32248338 to 32248341 3 - TSS region transcription start site region 41139
Tssr36677 4 32248536 to 32248557 21 + TSS region transcription start site region 36677
Tssr36678 4 32249273 to 32249310 37 + TSS region transcription start site region 36678
Tssr36679 4 32249385 to 32249420 35 + TSS region transcription start site region 36679
Tssr36680 4 32249421 to 32249428 7 + TSS region transcription start site region 36680
Tssr41140 4 32250353 to 32250359 6 - TSS region transcription start site region 41140
Tssr36681 4 32250574 to 32250589 15 + TSS region transcription start site region 36681
Tssr41141 4 32250685 to 32250695 10 - TSS region transcription start site region 41141
Tssr41142 4 32250731 to 32250743 12 - TSS region transcription start site region 41142
Bach2it1 4 32251761 to 32265835 14074 + sense intronic lncRNA gene BTB and CNC homology 2, intronic transcript 1
Tssr41143 4 32251859 to 32251869 10 - TSS region transcription start site region 41143
Tssr36682 4 32252260 to 32252288 28 + TSS region transcription start site region 36682
Tssr36683 4 32252536 to 32252543 7 + TSS region transcription start site region 36683
Tssr41144 4 32255456 to 32255462 6 - TSS region transcription start site region 41144
Tssr41145 4 32258153 to 32258165 12 - TSS region transcription start site region 41145
Tssr36684 4 32258662 to 32258674 12 + TSS region transcription start site region 36684
Tssr41146 4 32263147 to 32263162 15 - TSS region transcription start site region 41146
Tssr36685 4 32263880 to 32263893 13 + TSS region transcription start site region 36685
Tssr41147 4 32268069 to 32268107 38 - TSS region transcription start site region 41147
Tssr36686 4 32268318 to 32268348 30 + TSS region transcription start site region 36686
Tssr41148 4 32280692 to 32280706 14 - TSS region transcription start site region 41148
D4Mit267 4 32282644 to 32282758 114 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 267