Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:3164987-3574988

Filter by:
28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vmn1r2 4 3172083 to 3173669 1586 + protein coding gene vomeronasal 1 receptor 2
Vmn1r3 4 3184348 to 3185358 1010 - protein coding gene vomeronasal 1 receptor 3
Cpgi13989 4 3230888 to 3231423 535 CpG island CpG island 13989
Gm46840 4 3230925 to 3242575 11650 + protein coding gene predicted gene, 46840
Tssr36325 4 3231170 to 3231188 18 + TSS region transcription start site region 36325
AI838599 4 3256920 to 3259309 2389 + lincRNA gene expressed sequence AI838599
Gm11783 4 3258349 to 3259233 884 + pseudogene predicted gene 11783
Gm11786 4 3327175 to 3327329 154 + pseudogene predicted gene 11786
Tssr36326 4 3369987 to 3369988 1 + TSS region transcription start site region 36326
Gm11784 4 3386846 to 3388691 1845 + pseudogene predicted gene 11784
Tssr40804 4 3454356 to 3454361 5 - TSS region transcription start site region 40804
Gm11785 4 3455702 to 3456302 600 + pseudogene predicted gene 11785
Gm11787 4 3496713 to 3511963 15250 - pseudogene predicted gene 11787
Mir3471-2 4 3537090 to 3537191 101 + miRNA gene microRNA 3471-2
Tmem68 4 3549041 to 3574848 25807 - protein coding gene transmembrane protein 68
B230117O15Rik 4 3555081 to 3556224 1143 unclassified gene RIKEN cDNA B230117O15 gene
Cpgi13990 4 3574525 to 3575167 642 CpG island CpG island 13990
Tssr40805 4 3574762 to 3574774 12 - TSS region transcription start site region 40805
Tssr40806 4 3574776 to 3574821 45 - TSS region transcription start site region 40806
Tssr40807 4 3574822 to 3574840 18 - TSS region transcription start site region 40807
Tssr40808 4 3574844 to 3574850 6 - TSS region transcription start site region 40808
Tssr36327 4 3574855 to 3574871 16 + TSS region transcription start site region 36327
Tssr36328 4 3574872 to 3574913 41 + TSS region transcription start site region 36328
Tgs1 4 3574875 to 3616619 41744 + protein coding gene trimethylguanosine synthase 1
Tssr36329 4 3574917 to 3574933 16 + TSS region transcription start site region 36329
Tssr36330 4 3574937 to 3574955 18 + TSS region transcription start site region 36330
Tssr36331 4 3574958 to 3574970 12 + TSS region transcription start site region 36331
Tssr36332 4 3574984 to 3574993 9 + TSS region transcription start site region 36332