Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 4:3072083-3273003

Filter by:
23 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr36318 4 3089540 to 3089542 2 + TSS region transcription start site region 36318
Tssr40800 4 3089568 to 3089587 19 - TSS region transcription start site region 40800
Tssr36319 4 3089762 to 3089800 38 + TSS region transcription start site region 36319
Tssr40801 4 3089794 to 3089820 26 - TSS region transcription start site region 40801
Cpgi13988 4 3090117 to 3091120 1003 CpG island CpG island 13988
Tssr40802 4 3090215 to 3090234 19 - TSS region transcription start site region 40802
Tssr40803 4 3090272 to 3090280 8 - TSS region transcription start site region 40803
Tssr36320 4 3090303 to 3090310 7 + TSS region transcription start site region 36320
Tssr36321 4 3090382 to 3090428 46 + TSS region transcription start site region 36321
Tssr36322 4 3090473 to 3090497 24 + TSS region transcription start site region 36322
Tssr36323 4 3090671 to 3090687 16 + TSS region transcription start site region 36323
Tssr36324 4 3090776 to 3090802 26 + TSS region transcription start site region 36324
Vmn1r-ps2 4 3103759 to 3104592 833 - pseudogene vomeronasal 1 receptor, pseudogene 2
Vmn1r-ps3 4 3139141 to 3140057 916 - pseudogene vomeronasal 1 receptor, pseudogene 3
Vmn1r2 4 3172083 to 3173003 920 + protein coding gene vomeronasal 1 receptor 2
Vmn1r3 4 3184385 to 3185305 920 - protein coding gene vomeronasal 1 receptor 3
Gm52720 4 3192871 to 3200299 7428 - protein coding gene predicted gene, 52720
Cpgi13989 4 3230888 to 3231423 535 CpG island CpG island 13989
Tssr36325 4 3231170 to 3231188 18 + TSS region transcription start site region 36325
Gm46840 4 3231182 to 3258873 27691 + protein coding gene predicted gene, 46840
AI838599 4 3242055 to 3258092 16037 + lncRNA gene expressed sequence AI838599
4930573O21Rik 4 3247550 to 3249118 1568 + lncRNA gene RIKEN cDNA 4930573O21 gene
Gm11783 4 3258349 to 3259233 884 + pseudogene predicted gene 11783