Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:30431047-32101250

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm11924 4 30432112 to 30523783 91671 + lincRNA gene predicted gene 11924
Tssr36654 4 30664587 to 30664599 12 + TSS region transcription start site region 36654
4930556G01Rik 4 30664596 to 30796663 132067 + lincRNA gene RIKEN cDNA 4930556G01 gene
Tssr36655 4 30664604 to 30664614 10 + TSS region transcription start site region 36655
Gm22831 4 30701949 to 30702057 108 - miRNA gene predicted gene, 22831
Gm11920 4 30701973 to 30702535 562 - pseudogene predicted gene 11920
Tssr41128 4 30702742 to 30702747 5 - TSS region transcription start site region 41128
Tssr36656 4 30794947 to 30794949 2 + TSS region transcription start site region 36656
Gm42314 4 30992680 to 30996096 3416 + pseudogene predicted gene, 42314
Gm46849 4 31050066 to 31418507 368441 - lncRNA gene predicted gene, 46849
D4Mit192 4 31137059 to 31137166 107 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 192
Gm25705 4 31174909 to 31175012 103 - snRNA gene predicted gene, 25705
D4Ertd510e 4 31266047 to 31266250 203 DNA segment DNA segment, Chr 4, ERATO Doi 510, expressed
Gm32173 4 31324093 to 31332994 8901 + lncRNA gene predicted gene, 32173
Gm11922 4 31380472 to 31380946 474 + pseudogene predicted gene 11922
D4Mit292 4 31419024 to 31419124 100 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 292
Gm42315 4 31503062 to 31512101 9039 - lncRNA gene predicted gene, 42315
Tssr36657 4 31616576 to 31616578 2 + TSS region transcription start site region 36657
Gm42265 4 31628477 to 31628992 515 - lncRNA gene predicted gene, 42265
Gm32412 4 31822055 to 31831914 9859 - lncRNA gene predicted gene, 32412
Tssr41129 4 31877530 to 31877542 12 - TSS region transcription start site region 41129
Cpgi14097 4 31937539 to 31937973 434 CpG island CpG island 14097
2610008G14Rik 4 31962558 to 31963811 1253 unclassified gene RIKEN cDNA 2610008G14 gene
Cpgi14098 4 31963319 to 31964738 1419 CpG island CpG island 14098
Tssr36658 4 31963922 to 31963980 58 + TSS region transcription start site region 36658
Tssr36659 4 31964081 to 31964160 79 + TSS region transcription start site region 36659
Map3k7 4 31964097 to 32023467 59370 + protein coding gene mitogen-activated protein kinase kinase kinase 7
Tssr41130 4 31970541 to 31970548 7 - TSS region transcription start site region 41130
Tssr41131 4 31970560 to 31970571 11 - TSS region transcription start site region 41131
Tssr41132 4 31970576 to 31970583 7 - TSS region transcription start site region 41132
Gm11926 4 31990857 to 31991286 429 - pseudogene predicted gene 11926
Gm26254 4 31998624 to 31998741 117 - snRNA gene predicted gene, 26254
Tssr41133 4 31998738 to 31998742 4 - TSS region transcription start site region 41133
9530004M16Rik 4 32007988 to 32009135 1147 unclassified gene RIKEN cDNA 9530004M16 gene
Tssr36660 4 32015510 to 32015521 11 + TSS region transcription start site region 36660
Tssr36661 4 32015543 to 32015552 9 + TSS region transcription start site region 36661
Tssr36662 4 32051710 to 32051731 21 + TSS region transcription start site region 36662
Gm11927 4 32051738 to 32052914 1176 + pseudogene predicted gene 11927
Cpgi14099 4 32095365 to 32095606 241 CpG island CpG island 14099