Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:28948647-31439181

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epha7 4 28813131 to 28967499 154368 + protein coding gene Eph receptor A7
Tssr36653 4 28965101 to 28965143 42 + TSS region transcription start site region 36653
Gm11917 4 29068079 to 29088811 20732 + lincRNA gene predicted gene 11917
Gm11916 4 29090605 to 29091662 1057 + lincRNA gene predicted gene 11916
Gm11918 4 29125946 to 29126124 178 + pseudogene predicted gene 11918
D4Mit210 4 29154113 to 29154294 181 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 210
Gm11919 4 29195520 to 29196240 720 + pseudogene predicted gene 11919
D4Mit106 4 29310417 to 29310546 129 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 106
Gm11923 4 29490156 to 29490663 507 + pseudogene predicted gene 11923
Pgia35 4 29562377 to 29562509 132 QTL proteoglycan induced arthritis 35
D4Mit97 4 29562377 to 29562509 132 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 97
Jcdq1 4 29562377 to 29562509 132 QTL joint cartilage degeneration QTL 1
Gm11925 4 30193647 to 30194181 534 + pseudogene predicted gene 11925
Opfaq2 4 30343419 to 33824057 3480638 QTL open field activity QTL 2
Gm11924 4 30432112 to 30523783 91671 + lincRNA gene predicted gene 11924
Tssr36654 4 30664587 to 30664599 12 + TSS region transcription start site region 36654
4930556G01Rik 4 30664596 to 30796663 132067 + lincRNA gene RIKEN cDNA 4930556G01 gene
Tssr36655 4 30664604 to 30664614 10 + TSS region transcription start site region 36655
Gm22831 4 30701949 to 30702057 108 - miRNA gene predicted gene, 22831
Gm11920 4 30701973 to 30702535 562 - pseudogene predicted gene 11920
Tssr41128 4 30702742 to 30702747 5 - TSS region transcription start site region 41128
Tssr36656 4 30794947 to 30794949 2 + TSS region transcription start site region 36656
Gm42314 4 30992680 to 30996096 3416 + pseudogene predicted gene, 42314
Gm46849 4 31050066 to 31418507 368441 - lncRNA gene predicted gene, 46849
D4Mit192 4 31137059 to 31137166 107 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 192
Gm25705 4 31174909 to 31175012 103 - snRNA gene predicted gene, 25705
D4Ertd510e 4 31266047 to 31266250 203 DNA segment DNA segment, Chr 4, ERATO Doi 510, expressed
Gm32173 4 31324093 to 31332994 8901 + lncRNA gene predicted gene, 32173
Gm11922 4 31380472 to 31380946 474 + pseudogene predicted gene 11922
D4Mit292 4 31419024 to 31419124 100 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 292