Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:27783153-29843173

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm11914 4 27867149 to 27867655 506 - pseudogene predicted gene 11914
Tssr41127 4 27867587 to 27867621 34 - TSS region transcription start site region 41127
n-TIaat2 4 27904779 to 27904852 73 + tRNA gene nuclear encoded tRNA isoleucine 2 (anticodon AAT)
Tpm3-rs2 4 27996583 to 27996905 322 - pseudogene tropomyosin 3, related sequence 2
Gm11911 4 28067411 to 28068208 797 + pseudogene predicted gene 11911
Gm42313 4 28149988 to 28150475 487 + pseudogene predicted gene, 42313
Tssr36647 4 28353707 to 28353708 1 + TSS region transcription start site region 36647
Gm11907 4 28353783 to 28354789 1006 + pseudogene predicted gene 11907
Gm25378 4 28365316 to 28365444 128 + snoRNA gene predicted gene, 25378
Gm11908 4 28486112 to 28486458 346 - pseudogene predicted gene 11908
Gm11909 4 28559948 to 28560706 758 - pseudogene predicted gene 11909
Gm11910 4 28591653 to 28592571 918 - pseudogene predicted gene 11910
Gm11912 4 28592576 to 28592839 263 + pseudogene predicted gene 11912
Gm11913 4 28612326 to 28612742 416 + pseudogene predicted gene 11913
Cpgi14096 4 28812670 to 28815812 3142 CpG island CpG island 14096
Tssr36648 4 28812812 to 28812821 9 + TSS region transcription start site region 36648
Tssr1129 4 28813076 to 28813079 3 + TSS region transcription start site region 1129
Tssr36649 4 28813125 to 28813136 11 + TSS region transcription start site region 36649
Epha7 4 28813131 to 28967499 154368 + protein coding gene Eph receptor A7
Tssr36650 4 28813153 to 28813173 20 + TSS region transcription start site region 36650
Gm11915 4 28814297 to 28815076 779 - antisense lncRNA gene predicted gene 11915
Tssr1130 4 28815583 to 28815612 29 + TSS region transcription start site region 1130
D930030K17Rik 4 28836885 to 28839677 2792 unclassified gene RIKEN cDNA D930030K17 gene
Tssr36651 4 28847309 to 28847313 4 + TSS region transcription start site region 36651
Tssr36652 4 28914142 to 28914145 3 + TSS region transcription start site region 36652
2300010F08Rik 4 28926098 to 28929037 2939 unclassified gene RIKEN cDNA 2300010F08 gene
Tssr36653 4 28965101 to 28965143 42 + TSS region transcription start site region 36653
Gm11917 4 29068079 to 29088811 20732 + lincRNA gene predicted gene 11917
Gm11916 4 29090605 to 29091662 1057 + lincRNA gene predicted gene 11916
Gm11918 4 29125946 to 29126124 178 + pseudogene predicted gene 11918
D4Mit210 4 29154113 to 29154294 181 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 210
Gm11919 4 29195520 to 29196240 720 + pseudogene predicted gene 11919
D4Mit106 4 29310417 to 29310546 129 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 106
Gm11923 4 29490156 to 29490663 507 + pseudogene predicted gene 11923
Jcdq1 4 29562377 to 29562509 132 QTL joint cartilage degeneration QTL 1
D4Mit97 4 29562377 to 29562509 132 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 97
Pgia35 4 29562377 to 29562509 132 QTL proteoglycan induced arthritis 35