Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:23603782-24953783

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm25978 4 23626656 to 23626745 89 - miRNA gene predicted gene, 25978
D4Mit136 4 23627597 to 23627745 148 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 136
D4Mit96 4 23627655 to 23627834 179 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 96
Gm11890 4 23659928 to 23660344 416 - pseudogene predicted gene 11890
Gm31145 4 23689815 to 23835052 145237 - lncRNA gene predicted gene, 31145
Gm28448 4 23933488 to 23933954 466 - lincRNA gene predicted gene 28448
Tssr36634 4 24027800 to 24027810 10 + TSS region transcription start site region 36634
Gm11892 4 24238100 to 24239301 1201 + pseudogene predicted gene 11892
Tssr36635 4 24278782 to 24278783 1 + TSS region transcription start site region 36635
D4Mit266 4 24322299 to 24322402 103 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 266
Aaom1 4 24322299 to 46332776 22010477 QTL autoimmune aoritis in MRL mice 1
D4Mit211 4 24347053 to 24347198 145 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 211
D4Mit105.1 4 24401846 to 24401964 118 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 105.1
D4Mit105 4 24401966 to 24402094 128 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 105
Gm11891 4 24423477 to 24425192 1715 + pseudogene predicted gene 11891
Gm27243 4 24430370 to 24430890 520 - lincRNA gene predicted gene 27243
Tssr41097 4 24430555 to 24430586 31 - TSS region transcription start site region 41097
Tssr1127 4 24430730 to 24430742 12 - TSS region transcription start site region 1127
Tssr41098 4 24430838 to 24430855 17 - TSS region transcription start site region 41098
Cpgi14087 4 24496092 to 24497003 911 CpG island CpG island 14087
Tssr36636 4 24496434 to 24496499 65 + TSS region transcription start site region 36636
Mms22l 4 24496451 to 24602950 106499 + protein coding gene MMS22-like, DNA repair protein
Tssr36637 4 24556692 to 24556701 9 + TSS region transcription start site region 36637
Tssr36638 4 24585464 to 24585478 14 + TSS region transcription start site region 36638
Klhl32 4 24616226 to 24851113 234887 - protein coding gene kelch-like 32
Gm31436 4 24668331 to 24674095 5764 + lncRNA gene predicted gene, 31436
Cpgi14088 4 24792544 to 24792709 165 CpG island CpG island 14088
Gm11899 4 24792680 to 24800310 7630 + antisense lncRNA gene predicted gene 11899
Tssr36639 4 24799894 to 24799895 1 + TSS region transcription start site region 36639
Cpgi14089 4 24850602 to 24851435 833 CpG island CpG island 14089
Tssr41099 4 24850872 to 24850916 44 - TSS region transcription start site region 41099
Tssr41100 4 24851079 to 24851112 33 - TSS region transcription start site region 41100
Gm31379 4 24851260 to 24879267 28007 + lncRNA gene predicted gene, 31379
Gm46848 4 24881176 to 24897950 16774 - lncRNA gene predicted gene, 46848
Tssr36640 4 24894873 to 24894877 4 + TSS region transcription start site region 36640
4932702M13Rik 4 24894879 to 24897974 3095 unclassified gene RIKEN cDNA 4932702M13 gene
Cpgi14090 4 24897784 to 24898472 688 CpG island CpG island 14090
Tssr36641 4 24898080 to 24898158 78 + TSS region transcription start site region 36641
Ndufaf4 4 24898083 to 24905001 6918 + protein coding gene NADH:ubiquinone oxidoreductase complex assembly factor 4
D4Mit191 4 24948247 to 24948367 120 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 191