Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:22702655-24552834

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm11879 4 22704057 to 22704758 701 + pseudogene predicted gene 11879
Gm24078 4 22747131 to 22747233 102 + miRNA gene predicted gene, 24078
Gm42262 4 22771853 to 22836256 64403 - lncRNA gene predicted gene, 42262
Tssr41096 4 22835480 to 22835499 19 - TSS region transcription start site region 41096
1700025O08Rik 4 22928167 to 22938435 10268 - lincRNA gene RIKEN cDNA 1700025O08 gene
Gm30886 4 22938575 to 22979509 40934 + lncRNA gene predicted gene, 30886
Gm38450 4 23260784 to 23311024 50240 + lncRNA gene predicted gene, 38450
Gm11884 4 23387665 to 23397837 10172 + lincRNA gene predicted gene 11884
Gm31085 4 23468948 to 23514565 45617 - lncRNA gene predicted gene, 31085
Gm11888 4 23485277 to 23486020 743 + pseudogene predicted gene 11888
Gm11889 4 23517362 to 23518440 1078 - pseudogene predicted gene 11889
Cpgi14086 4 23519140 to 23519459 319 CpG island CpG island 14086
Gm25978 4 23626656 to 23626745 89 - miRNA gene predicted gene, 25978
D4Mit136 4 23627597 to 23627745 148 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 136
D4Mit96 4 23627655 to 23627834 179 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 96
Gm11890 4 23659928 to 23660344 416 - pseudogene predicted gene 11890
Gm31145 4 23689815 to 23835052 145237 - lncRNA gene predicted gene, 31145
Gm28448 4 23933488 to 23933954 466 - lincRNA gene predicted gene 28448
Tssr36634 4 24027800 to 24027810 10 + TSS region transcription start site region 36634
Gm11892 4 24238100 to 24239301 1201 + pseudogene predicted gene 11892
Tssr36635 4 24278782 to 24278783 1 + TSS region transcription start site region 36635
D4Mit266 4 24322299 to 24322402 103 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 266
Aaom1 4 24322299 to 46332776 22010477 QTL autoimmune aoritis in MRL mice 1
D4Mit211 4 24347053 to 24347198 145 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 211
D4Mit105.1 4 24401846 to 24401964 118 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 105.1
D4Mit105 4 24401966 to 24402094 128 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 105
Gm11891 4 24423477 to 24425192 1715 + pseudogene predicted gene 11891
Gm27243 4 24430370 to 24430890 520 - lincRNA gene predicted gene 27243
Tssr41097 4 24430555 to 24430586 31 - TSS region transcription start site region 41097
Tssr1127 4 24430730 to 24430742 12 - TSS region transcription start site region 1127
Tssr41098 4 24430838 to 24430855 17 - TSS region transcription start site region 41098
Cpgi14087 4 24496092 to 24497003 911 CpG island CpG island 14087
Tssr36636 4 24496434 to 24496499 65 + TSS region transcription start site region 36636
Mms22l 4 24496451 to 24602950 106499 + protein coding gene MMS22-like, DNA repair protein