Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:19883706-20807818

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp6v0d2 4 19876838 to 19922566 45728 - protein coding gene ATPase, H+ transporting, lysosomal V0 subunit D2
Tssr41055 4 19892342 to 19892352 10 - TSS region transcription start site region 41055
Tssr41056 4 19892357 to 19892375 18 - TSS region transcription start site region 41056
Tssr41057 4 19892382 to 19892411 29 - TSS region transcription start site region 41057
Tssr41058 4 19892563 to 19892572 9 - TSS region transcription start site region 41058
Tssr41059 4 19895757 to 19895780 23 - TSS region transcription start site region 41059
Tssr41060 4 19900507 to 19900515 8 - TSS region transcription start site region 41060
Tssr41061 4 19900923 to 19900934 11 - TSS region transcription start site region 41061
Tssr41062 4 19900957 to 19900978 21 - TSS region transcription start site region 41062
Tssr41063 4 19900989 to 19901000 11 - TSS region transcription start site region 41063
Tssr41064 4 19901179 to 19901190 11 - TSS region transcription start site region 41064
4833419A21Rik 4 19902927 to 19903929 1002 unclassified gene RIKEN cDNA 4833419A21 gene
Tssr41065 4 19908542 to 19908560 18 - TSS region transcription start site region 41065
Tssr41066 4 19908617 to 19908642 25 - TSS region transcription start site region 41066
Tssr41067 4 19920192 to 19920208 16 - TSS region transcription start site region 41067
Tssr41068 4 19920769 to 19920774 5 - TSS region transcription start site region 41068
Tssr41069 4 19922494 to 19922550 56 - TSS region transcription start site region 41069
Tssr41070 4 19922554 to 19922572 18 - TSS region transcription start site region 41070
Tssr41071 4 19922599 to 19922614 15 - TSS region transcription start site region 41071
Tssr41072 4 19923516 to 19923532 16 - TSS region transcription start site region 41072
4930480G23Rik 4 19979445 to 19985388 5943 - antisense lncRNA gene RIKEN cDNA 4930480G23 gene
Ttpa 4 20007938 to 20030785 22847 + protein coding gene tocopherol (alpha) transfer protein
Tssr36592 4 20007972 to 20008006 34 + TSS region transcription start site region 36592
Cpgi14065 4 20008015 to 20009043 1028 CpG island CpG island 14065
Tssr36593 4 20008393 to 20008451 58 + TSS region transcription start site region 36593
Tssr36594 4 20008461 to 20008472 11 + TSS region transcription start site region 36594
Tssr36595 4 20008494 to 20008501 7 + TSS region transcription start site region 36595
Tssr36596 4 20008508 to 20008517 9 + TSS region transcription start site region 36596
Tssr36597 4 20009367 to 20009406 39 + TSS region transcription start site region 36597
Tssr36598 4 20028712 to 20028720 8 + TSS region transcription start site region 36598
Tssr36599 4 20029354 to 20029390 36 + TSS region transcription start site region 36599
Tssr1126 4 20032263 to 20032292 29 + TSS region transcription start site region 1126
4930598A11Rik 4 20032846 to 20041564 8718 - lincRNA gene RIKEN cDNA 4930598A11 gene
Cpgi14066 4 20041601 to 20042493 892 CpG island CpG island 14066
Tssr36600 4 20041986 to 20041997 11 + TSS region transcription start site region 36600
Ggh 4 20041987 to 20066111 24124 + protein coding gene gamma-glutamyl hydrolase
Tssr36601 4 20042014 to 20042032 18 + TSS region transcription start site region 36601
Tssr36602 4 20042046 to 20042107 61 + TSS region transcription start site region 36602
Tssr36603 4 20042115 to 20042120 5 + TSS region transcription start site region 36603
Tssr36604 4 20042134 to 20042141 7 + TSS region transcription start site region 36604
Tssr36605 4 20042152 to 20042171 19 + TSS region transcription start site region 36605
Gm29814 4 20073320 to 20073790 470 + pseudogene predicted gene, 29814
Nkain3 4 20118874 to 20778866 659992 - protein coding gene Na+/K+ transporting ATPase interacting 3
Gm11872 4 20343706 to 20347818 4112 + antisense lncRNA gene predicted gene 11872
Gm11873 4 20391096 to 20392399 1303 + pseudogene predicted gene 11873
D4Mit268 4 20615439 to 20615586 147 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 268
D4Mit293 4 20730003 to 20730125 122 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 293
Cpgi14067 4 20777884 to 20778739 855 CpG island CpG island 14067
Tssr41073 4 20778527 to 20778593 66 - TSS region transcription start site region 41073
Tssr41074 4 20778696 to 20778707 11 - TSS region transcription start site region 41074
Tssr41075 4 20778709 to 20778730 21 - TSS region transcription start site region 41075
Tssr41076 4 20778852 to 20778876 24 - TSS region transcription start site region 41076
Tssr41077 4 20778885 to 20778907 22 - TSS region transcription start site region 41077