Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:19766096-21017399

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr36589 4 19818722 to 19818743 21 + TSS region transcription start site region 36589
Slc7a13 4 19818727 to 19842213 23486 + protein coding gene solute carrier family 7, (cationic amino acid transporter, y+ system) member 13
Tssr41029 4 19837945 to 19837951 6 - TSS region transcription start site region 41029
Tssr36590 4 19852130 to 19852133 3 + TSS region transcription start site region 36590
D4Mit135 4 19860602 to 19860747 145 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 135
Tssr36591 4 19872221 to 19872232 11 + TSS region transcription start site region 36591
Atp6v0d2 4 19876838 to 19922566 45728 - protein coding gene ATPase, H+ transporting, lysosomal V0 subunit D2
Tssr41030 4 19877129 to 19877142 13 - TSS region transcription start site region 41030
Tssr41031 4 19877194 to 19877204 10 - TSS region transcription start site region 41031
Tssr41032 4 19877211 to 19877221 10 - TSS region transcription start site region 41032
Tssr41033 4 19877250 to 19877287 37 - TSS region transcription start site region 41033
Tssr41034 4 19877291 to 19877319 28 - TSS region transcription start site region 41034
Tssr41035 4 19877326 to 19877345 19 - TSS region transcription start site region 41035
Tssr41036 4 19877353 to 19877395 42 - TSS region transcription start site region 41036
Tssr41037 4 19877475 to 19877483 8 - TSS region transcription start site region 41037
Tssr41038 4 19877541 to 19877552 11 - TSS region transcription start site region 41038
Tssr41039 4 19877553 to 19877580 27 - TSS region transcription start site region 41039
Tssr41040 4 19877595 to 19877613 18 - TSS region transcription start site region 41040
Tssr41041 4 19877622 to 19877627 5 - TSS region transcription start site region 41041
Tssr41042 4 19877629 to 19877643 14 - TSS region transcription start site region 41042
Tssr41043 4 19877658 to 19877669 11 - TSS region transcription start site region 41043
Tssr41044 4 19877746 to 19877757 11 - TSS region transcription start site region 41044
Tssr41045 4 19877771 to 19877795 24 - TSS region transcription start site region 41045
Tssr41046 4 19877807 to 19877822 15 - TSS region transcription start site region 41046
Tssr41047 4 19877875 to 19877886 11 - TSS region transcription start site region 41047
Tssr41048 4 19877894 to 19877903 9 - TSS region transcription start site region 41048
Tssr41049 4 19878016 to 19878027 11 - TSS region transcription start site region 41049
Tssr41050 4 19878155 to 19878169 14 - TSS region transcription start site region 41050
Tssr41051 4 19878300 to 19878307 7 - TSS region transcription start site region 41051
Tssr41052 4 19880031 to 19880045 14 - TSS region transcription start site region 41052
Tssr41053 4 19881330 to 19881345 15 - TSS region transcription start site region 41053
Tssr41054 4 19881363 to 19881384 21 - TSS region transcription start site region 41054
Tssr41055 4 19892342 to 19892352 10 - TSS region transcription start site region 41055
Tssr41056 4 19892357 to 19892375 18 - TSS region transcription start site region 41056
Tssr41057 4 19892382 to 19892411 29 - TSS region transcription start site region 41057
Tssr41058 4 19892563 to 19892572 9 - TSS region transcription start site region 41058
Tssr41059 4 19895757 to 19895780 23 - TSS region transcription start site region 41059
Tssr41060 4 19900507 to 19900515 8 - TSS region transcription start site region 41060
Tssr41061 4 19900923 to 19900934 11 - TSS region transcription start site region 41061
Tssr41062 4 19900957 to 19900978 21 - TSS region transcription start site region 41062
Tssr41063 4 19900989 to 19901000 11 - TSS region transcription start site region 41063
Tssr41064 4 19901179 to 19901190 11 - TSS region transcription start site region 41064
4833419A21Rik 4 19902927 to 19903929 1002 unclassified gene RIKEN cDNA 4833419A21 gene
Tssr41065 4 19908542 to 19908560 18 - TSS region transcription start site region 41065
Tssr41066 4 19908617 to 19908642 25 - TSS region transcription start site region 41066
Tssr41067 4 19920192 to 19920208 16 - TSS region transcription start site region 41067
Tssr41068 4 19920769 to 19920774 5 - TSS region transcription start site region 41068
Tssr41069 4 19922494 to 19922550 56 - TSS region transcription start site region 41069
Tssr41070 4 19922554 to 19922572 18 - TSS region transcription start site region 41070
Tssr41071 4 19922599 to 19922614 15 - TSS region transcription start site region 41071
Tssr41072 4 19923516 to 19923532 16 - TSS region transcription start site region 41072
4930480G23Rik 4 19979445 to 19985388 5943 - antisense lncRNA gene RIKEN cDNA 4930480G23 gene
Ttpa 4 20007938 to 20030785 22847 + protein coding gene tocopherol (alpha) transfer protein
Tssr36592 4 20007972 to 20008006 34 + TSS region transcription start site region 36592
Cpgi14065 4 20008015 to 20009043 1028 CpG island CpG island 14065
Tssr36593 4 20008393 to 20008451 58 + TSS region transcription start site region 36593
Tssr36594 4 20008461 to 20008472 11 + TSS region transcription start site region 36594
Tssr36595 4 20008494 to 20008501 7 + TSS region transcription start site region 36595
Tssr36596 4 20008508 to 20008517 9 + TSS region transcription start site region 36596
Tssr36597 4 20009367 to 20009406 39 + TSS region transcription start site region 36597
Tssr36598 4 20028712 to 20028720 8 + TSS region transcription start site region 36598
Tssr36599 4 20029354 to 20029390 36 + TSS region transcription start site region 36599
Tssr1126 4 20032263 to 20032292 29 + TSS region transcription start site region 1126
4930598A11Rik 4 20032846 to 20041564 8718 - lincRNA gene RIKEN cDNA 4930598A11 gene
Cpgi14066 4 20041601 to 20042493 892 CpG island CpG island 14066
Tssr36600 4 20041986 to 20041997 11 + TSS region transcription start site region 36600
Ggh 4 20041987 to 20066111 24124 + protein coding gene gamma-glutamyl hydrolase
Tssr36601 4 20042014 to 20042032 18 + TSS region transcription start site region 36601
Tssr36602 4 20042046 to 20042107 61 + TSS region transcription start site region 36602
Tssr36603 4 20042115 to 20042120 5 + TSS region transcription start site region 36603
Tssr36604 4 20042134 to 20042141 7 + TSS region transcription start site region 36604
Tssr36605 4 20042152 to 20042171 19 + TSS region transcription start site region 36605
Gm29814 4 20073320 to 20073790 470 + pseudogene predicted gene, 29814
Nkain3 4 20118874 to 20778866 659992 - protein coding gene Na+/K+ transporting ATPase interacting 3
Gm11872 4 20343706 to 20347818 4112 + antisense lncRNA gene predicted gene 11872
Gm11873 4 20391096 to 20392399 1303 + pseudogene predicted gene 11873
D4Mit268 4 20615439 to 20615586 147 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 268
D4Mit293 4 20730003 to 20730125 122 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 293
Cpgi14067 4 20777884 to 20778739 855 CpG island CpG island 14067
Tssr41073 4 20778527 to 20778593 66 - TSS region transcription start site region 41073
Tssr41074 4 20778696 to 20778707 11 - TSS region transcription start site region 41074
Tssr41075 4 20778709 to 20778730 21 - TSS region transcription start site region 41075
Tssr41076 4 20778852 to 20778876 24 - TSS region transcription start site region 41076
Tssr41077 4 20778885 to 20778907 22 - TSS region transcription start site region 41077
Tssr41078 4 20866887 to 20866892 5 - TSS region transcription start site region 41078
Gm11871 4 21009907 to 21010916 1009 - pseudogene predicted gene 11871