Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:18717633-19527642

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm11867 4 18407349 to 18891842 484493 + unclassified non-coding RNA gene predicted gene 11867
D4Dcr2 4 18729450 to 18729547 97 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 2
Gm24419 4 18730217 to 18730548 331 - unclassified non-coding RNA gene predicted gene, 24419
Cnbd1 4 18767985 to 18862139 94154 - protein coding gene cyclic nucleotide binding domain containing 1
D4Dcr3 4 18824912 to 18825007 95 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 3
Gm11868 4 18844205 to 18845679 1474 - pseudogene predicted gene 11868
Gm12392 4 18964564 to 18965501 937 + pseudogene predicted gene 12392
D4Dcr33 4 18966474 to 18966574 100 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 33
D4Mit260 4 19019535 to 19019674 139 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 260
Tssr40994 4 19122511 to 19122524 13 - TSS region transcription start site region 40994
Tssr40995 4 19122528 to 19122531 3 - TSS region transcription start site region 40995
Tssr40996 4 19122536 to 19122555 19 - TSS region transcription start site region 40996
Tssr1124 4 19122633 to 19122642 9 + TSS region transcription start site region 1124
Gm42258 4 19122636 to 19137732 15096 + lncRNA gene predicted gene, 42258
Tssr36571 4 19122653 to 19122681 28 + TSS region transcription start site region 36571
D4Dcr4 4 19224661 to 19224761 100 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 4
Gm12393 4 19259096 to 19259943 847 + pseudogene predicted gene 12393
Cngb3 4 19280850 to 19510623 229773 + protein coding gene cyclic nucleotide gated channel beta 3
Tssr36572 4 19280862 to 19280907 45 + TSS region transcription start site region 36572
Tssr36573 4 19280910 to 19280919 9 + TSS region transcription start site region 36573
Tssr36574 4 19280920 to 19280931 11 + TSS region transcription start site region 36574
Tssr36575 4 19298257 to 19298258 1 + TSS region transcription start site region 36575
Gm11877 4 19298333 to 19299184 851 + pseudogene predicted gene 11877
D4Dcr5 4 19442025 to 19442127 102 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 5
Tssr36576 4 19491947 to 19491959 12 + TSS region transcription start site region 36576
Gm25655 4 19514490 to 19514779 289 - unclassified non-coding RNA gene predicted gene, 25655
Cpne3 4 19519254 to 19570108 50854 - protein coding gene copine III
Tssr40997 4 19520239 to 19520252 13 - TSS region transcription start site region 40997
Tssr40998 4 19521562 to 19521597 35 - TSS region transcription start site region 40998
Tssr40999 4 19526586 to 19526588 2 - TSS region transcription start site region 40999