Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:155222039-155572051

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97 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ski 4 155154075 to 155222592 68517 - protein coding gene ski sarcoma viral oncogene homolog (avian)
Cpgi15463 4 155221445 to 155223903 2458 CpG island CpG island 15463
Tssr44932 4 155223068 to 155223086 18 - TSS region transcription start site region 44932
Tssr44933 4 155223206 to 155223218 12 - TSS region transcription start site region 44933
Tssr44934 4 155223233 to 155223249 16 - TSS region transcription start site region 44934
Gm42364 4 155225440 to 155228645 3205 - lncRNA gene predicted gene, 42364
Tssr40624 4 155234536 to 155234547 11 + TSS region transcription start site region 40624
Tssr40625 4 155235486 to 155235522 36 + TSS region transcription start site region 40625
Gm33187 4 155240265 to 155243884 3619 + lncRNA gene predicted gene, 33187
Tssr40626 4 155246860 to 155246872 12 + TSS region transcription start site region 40626
Cpgi15464 4 155249637 to 155250815 1178 CpG island CpG island 15464
Faap20 4 155249802 to 155256687 6885 + protein coding gene Fanconi anemia core complex associated protein 20
Tssr40627 4 155249960 to 155250010 50 + TSS region transcription start site region 40627
Tssr40628 4 155250088 to 155250123 35 + TSS region transcription start site region 40628
Tssr40629 4 155250189 to 155250201 12 + TSS region transcription start site region 40629
Tssr40630 4 155250283 to 155250294 11 + TSS region transcription start site region 40630
Prkcz 4 155260129 to 155361361 101232 - protein coding gene protein kinase C, zeta
Tssr44935 4 155328646 to 155328690 44 - TSS region transcription start site region 44935
Gm27200 4 155343683 to 155344465 782 + antisense lncRNA gene predicted gene 27200
Cpgi15465 4 155344595 to 155345911 1316 CpG island CpG island 15465
Tssr44936 4 155345491 to 155345494 3 - TSS region transcription start site region 44936
Tssr44937 4 155345640 to 155345649 9 - TSS region transcription start site region 44937
Tssr44938 4 155345678 to 155345689 11 - TSS region transcription start site region 44938
Tssr44939 4 155345696 to 155345799 103 - TSS region transcription start site region 44939
Tssr1398 4 155352714 to 155352715 1 + TSS region transcription start site region 1398
Cpgi15466 4 155360887 to 155362133 1246 CpG island CpG island 15466
Tssr44940 4 155361322 to 155361346 24 - TSS region transcription start site region 44940
Tssr44941 4 155361356 to 155361433 77 - TSS region transcription start site region 44941
Tssr40631 4 155361667 to 155361678 11 + TSS region transcription start site region 40631
Gabrd 4 155384979 to 155398069 13090 - protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit delta
Tssr40632 4 155397039 to 155397051 12 + TSS region transcription start site region 40632
Tssr40633 4 155397055 to 155397069 14 + TSS region transcription start site region 40633
Tssr40634 4 155397083 to 155397090 7 + TSS region transcription start site region 40634
Cpgi15467 4 155397335 to 155398527 1192 CpG island CpG island 15467
Tssr44942 4 155397981 to 155397997 16 - TSS region transcription start site region 44942
Tssr44943 4 155398011 to 155398028 17 - TSS region transcription start site region 44943
Tssr44944 4 155398037 to 155398055 18 - TSS region transcription start site region 44944
Tssr44945 4 155398059 to 155398080 21 - TSS region transcription start site region 44945
Tssr40635 4 155398165 to 155398197 32 + TSS region transcription start site region 40635
5830444B04Rik 4 155400969 to 155421704 20735 - lncRNA gene RIKEN cDNA 5830444B04 gene
Cpgi15468 4 155408983 to 155409723 740 CpG island CpG island 15468
Cfap74 4 155409190 to 155466823 57633 + protein coding gene cilia and flagella associated protein 74
Tssr40636 4 155409201 to 155409266 65 + TSS region transcription start site region 40636
Tssr40637 4 155409270 to 155409280 10 + TSS region transcription start site region 40637
Tssr40638 4 155409286 to 155409289 3 + TSS region transcription start site region 40638
Tssr44946 4 155411313 to 155411318 5 - TSS region transcription start site region 44946
9630009N12Rik 4 155411621 to 155412151 530 unclassified gene RIKEN cDNA 9630009N12 gene
Tssr44947 4 155414766 to 155414778 12 - TSS region transcription start site region 44947
Tssr44948 4 155414781 to 155414804 23 - TSS region transcription start site region 44948
Tssr44949 4 155414879 to 155414884 5 - TSS region transcription start site region 44949
Tssr40639 4 155414922 to 155414951 29 + TSS region transcription start site region 40639
Tssr40640 4 155414977 to 155414986 9 + TSS region transcription start site region 40640
Tssr40641 4 155415011 to 155415018 7 + TSS region transcription start site region 40641
Tssr40642 4 155466594 to 155466604 10 + TSS region transcription start site region 40642
Cpgi15469 4 155469038 to 155469648 610 CpG island CpG island 15469
Tmem52 4 155469114 to 155470858 1744 + protein coding gene transmembrane protein 52
Tssr40643 4 155469123 to 155469142 19 + TSS region transcription start site region 40643
D4Mit59 4 155475972 to 155476079 107 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 59
Cpgi15470 4 155481218 to 155481676 458 CpG island CpG island 15470
Tssr44950 4 155482887 to 155482897 10 - TSS region transcription start site region 44950
Cpgi15471 4 155490596 to 155492639 2043 CpG island CpG island 15471
Tssr40644 4 155491050 to 155491069 19 + TSS region transcription start site region 40644
Tssr44951 4 155491202 to 155491215 13 - TSS region transcription start site region 44951
Tssr44952 4 155491218 to 155491234 16 - TSS region transcription start site region 44952
Tssr40645 4 155491353 to 155491411 58 + TSS region transcription start site region 40645
Gnb1 4 155491361 to 155559269 67908 + protein coding gene guanine nucleotide binding protein (G protein), beta 1
Tssr40646 4 155495214 to 155495226 12 + TSS region transcription start site region 40646
Gm13171 4 155502316 to 155502706 390 - pseudogene predicted gene 13171
Tssr40647 4 155510522 to 155510525 3 + TSS region transcription start site region 40647
Tssr40648 4 155522529 to 155522543 14 + TSS region transcription start site region 40648
Tssr40649 4 155522560 to 155522591 31 + TSS region transcription start site region 40649
Tssr40650 4 155522592 to 155522622 30 + TSS region transcription start site region 40650
Tssr40651 4 155536797 to 155536801 4 + TSS region transcription start site region 40651
Tssr40652 4 155543056 to 155543076 20 + TSS region transcription start site region 40652
Tssr40653 4 155546855 to 155546869 14 + TSS region transcription start site region 40653
Tssr40654 4 155546975 to 155546992 17 + TSS region transcription start site region 40654
Tssr40655 4 155553418 to 155553435 17 + TSS region transcription start site region 40655
Tssr40656 4 155555064 to 155555081 17 + TSS region transcription start site region 40656
Tssr40657 4 155555146 to 155555192 46 + TSS region transcription start site region 40657
Tssr40658 4 155557163 to 155557200 37 + TSS region transcription start site region 40658
Tssr40659 4 155557741 to 155557753 12 + TSS region transcription start site region 40659
Tssr40660 4 155557940 to 155557968 28 + TSS region transcription start site region 40660
Tssr40661 4 155558021 to 155558043 22 + TSS region transcription start site region 40661
Tssr40662 4 155558110 to 155558115 5 + TSS region transcription start site region 40662
Tssr40663 4 155558257 to 155558279 22 + TSS region transcription start site region 40663
Tssr40664 4 155558795 to 155558808 13 + TSS region transcription start site region 40664
Tssr40665 4 155558958 to 155558981 23 + TSS region transcription start site region 40665
Tssr40666 4 155559772 to 155559808 36 + TSS region transcription start site region 40666
Tssr44953 4 155561892 to 155561898 6 - TSS region transcription start site region 44953
Tssr40667 4 155562348 to 155562413 65 + TSS region transcription start site region 40667
Nadk 4 155562392 to 155591001 28609 + protein coding gene NAD kinase
Tssr40668 4 155562414 to 155562425 11 + TSS region transcription start site region 40668
Tssr1399 4 155563264 to 155563274 10 + TSS region transcription start site region 1399
Tssr40669 4 155563307 to 155563321 14 + TSS region transcription start site region 40669
Cpgi15472 4 155563359 to 155564400 1041 CpG island CpG island 15472
Tssr40670 4 155563732 to 155563743 11 + TSS region transcription start site region 40670
Tssr40671 4 155563798 to 155563865 67 + TSS region transcription start site region 40671