Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:155169595-155520911

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ski 4 155154075 to 155222592 68517 - protein coding gene ski sarcoma viral oncogene homolog (avian)
Tssr44929 4 155197570 to 155197575 5 - TSS region transcription start site region 44929
Tssr44930 4 155200757 to 155200771 14 - TSS region transcription start site region 44930
Cpgi15462 4 155214957 to 155215116 159 CpG island CpG island 15462
Tssr44931 4 155217205 to 155217212 7 - TSS region transcription start site region 44931
Tssr40622 4 155217532 to 155217562 30 + TSS region transcription start site region 40622
Cpgi15463 4 155221445 to 155223903 2458 CpG island CpG island 15463
Tssr40623 4 155221677 to 155221681 4 + TSS region transcription start site region 40623
Tssr44932 4 155223068 to 155223086 18 - TSS region transcription start site region 44932
Tssr44933 4 155223206 to 155223218 12 - TSS region transcription start site region 44933
Tssr44934 4 155223233 to 155223249 16 - TSS region transcription start site region 44934
Gm42364 4 155225440 to 155228645 3205 - lncRNA gene predicted gene, 42364
Tssr40624 4 155234536 to 155234547 11 + TSS region transcription start site region 40624
Tssr40625 4 155235486 to 155235522 36 + TSS region transcription start site region 40625
Gm33187 4 155240265 to 155243884 3619 + lncRNA gene predicted gene, 33187
Tssr40626 4 155246860 to 155246872 12 + TSS region transcription start site region 40626
Cpgi15464 4 155249637 to 155250815 1178 CpG island CpG island 15464
Faap20 4 155249802 to 155256687 6885 + protein coding gene Fanconi anemia core complex associated protein 20
Tssr40627 4 155249960 to 155250010 50 + TSS region transcription start site region 40627
Tssr40628 4 155250088 to 155250123 35 + TSS region transcription start site region 40628
Tssr40629 4 155250189 to 155250201 12 + TSS region transcription start site region 40629
Tssr40630 4 155250283 to 155250294 11 + TSS region transcription start site region 40630
Prkcz 4 155260129 to 155361361 101232 - protein coding gene protein kinase C, zeta
Tssr44935 4 155328646 to 155328690 44 - TSS region transcription start site region 44935
Gm27200 4 155343683 to 155344465 782 + antisense lncRNA gene predicted gene 27200
Cpgi15465 4 155344595 to 155345911 1316 CpG island CpG island 15465
Tssr44936 4 155345491 to 155345494 3 - TSS region transcription start site region 44936
Tssr44937 4 155345640 to 155345649 9 - TSS region transcription start site region 44937
Tssr44938 4 155345678 to 155345689 11 - TSS region transcription start site region 44938
Tssr44939 4 155345696 to 155345799 103 - TSS region transcription start site region 44939
Tssr1398 4 155352714 to 155352715 1 + TSS region transcription start site region 1398
Cpgi15466 4 155360887 to 155362133 1246 CpG island CpG island 15466
Tssr44940 4 155361322 to 155361346 24 - TSS region transcription start site region 44940
Tssr44941 4 155361356 to 155361433 77 - TSS region transcription start site region 44941
Tssr40631 4 155361667 to 155361678 11 + TSS region transcription start site region 40631
Gabrd 4 155384979 to 155398069 13090 - protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit delta
Tssr40632 4 155397039 to 155397051 12 + TSS region transcription start site region 40632
Tssr40633 4 155397055 to 155397069 14 + TSS region transcription start site region 40633
Tssr40634 4 155397083 to 155397090 7 + TSS region transcription start site region 40634
Cpgi15467 4 155397335 to 155398527 1192 CpG island CpG island 15467
Tssr44942 4 155397981 to 155397997 16 - TSS region transcription start site region 44942
Tssr44943 4 155398011 to 155398028 17 - TSS region transcription start site region 44943
Tssr44944 4 155398037 to 155398055 18 - TSS region transcription start site region 44944
Tssr44945 4 155398059 to 155398080 21 - TSS region transcription start site region 44945
Tssr40635 4 155398165 to 155398197 32 + TSS region transcription start site region 40635
5830444B04Rik 4 155400969 to 155421704 20735 - lncRNA gene RIKEN cDNA 5830444B04 gene
Cpgi15468 4 155408983 to 155409723 740 CpG island CpG island 15468
Cfap74 4 155409190 to 155466823 57633 + protein coding gene cilia and flagella associated protein 74
Tssr40636 4 155409201 to 155409266 65 + TSS region transcription start site region 40636
Tssr40637 4 155409270 to 155409280 10 + TSS region transcription start site region 40637
Tssr40638 4 155409286 to 155409289 3 + TSS region transcription start site region 40638
Tssr44946 4 155411313 to 155411318 5 - TSS region transcription start site region 44946
9630009N12Rik 4 155411621 to 155412151 530 unclassified gene RIKEN cDNA 9630009N12 gene
Tssr44947 4 155414766 to 155414778 12 - TSS region transcription start site region 44947
Tssr44948 4 155414781 to 155414804 23 - TSS region transcription start site region 44948
Tssr44949 4 155414879 to 155414884 5 - TSS region transcription start site region 44949
Tssr40639 4 155414922 to 155414951 29 + TSS region transcription start site region 40639
Tssr40640 4 155414977 to 155414986 9 + TSS region transcription start site region 40640
Tssr40641 4 155415011 to 155415018 7 + TSS region transcription start site region 40641
Tssr40642 4 155466594 to 155466604 10 + TSS region transcription start site region 40642
Cpgi15469 4 155469038 to 155469648 610 CpG island CpG island 15469
Tmem52 4 155469114 to 155470858 1744 + protein coding gene transmembrane protein 52
Tssr40643 4 155469123 to 155469142 19 + TSS region transcription start site region 40643
D4Mit59 4 155475972 to 155476079 107 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 59
Cpgi15470 4 155481218 to 155481676 458 CpG island CpG island 15470
Tssr44950 4 155482887 to 155482897 10 - TSS region transcription start site region 44950
Cpgi15471 4 155490596 to 155492639 2043 CpG island CpG island 15471
Tssr40644 4 155491050 to 155491069 19 + TSS region transcription start site region 40644
Tssr44951 4 155491202 to 155491215 13 - TSS region transcription start site region 44951
Tssr44952 4 155491218 to 155491234 16 - TSS region transcription start site region 44952
Tssr40645 4 155491353 to 155491411 58 + TSS region transcription start site region 40645
Gnb1 4 155491361 to 155559269 67908 + protein coding gene guanine nucleotide binding protein (G protein), beta 1
Tssr40646 4 155495214 to 155495226 12 + TSS region transcription start site region 40646
Gm13171 4 155502316 to 155502706 390 - pseudogene predicted gene 13171
Tssr40647 4 155510522 to 155510525 3 + TSS region transcription start site region 40647