Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:154961322-155761346

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236 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(4D4Mit190-D4Mit51)2Aam 4 150704851 to 155046016 4341165 chromosomal deletion deletion, Chr 4, Alea A Mills 2
Dp(4D4Mit190-D4Mit51)1Aam 4 150704851 to 155046016 4341165 chromosomal duplication duplication, Chr 4, Alea A Mills 1
Cpgi15452 4 154960070 to 154961889 1819 CpG island CpG island 15452
Gm20421 4 154960770 to 154961678 908 - unclassified non-coding RNA gene predicted gene 20421
Hes5 4 154960923 to 154962371 1448 + protein coding gene hes family bHLH transcription factor 5
Tssr40615 4 154961398 to 154961418 20 + TSS region transcription start site region 40615
Tssr40616 4 154961463 to 154961474 11 + TSS region transcription start site region 40616
Cpgi15453 4 154963689 to 154965131 1442 CpG island CpG island 15453
Tssr40617 4 154964117 to 154964147 30 + TSS region transcription start site region 40617
Pank4 4 154964123 to 154980938 16815 + protein coding gene pantothenate kinase 4
Gm42363 4 154964284 to 154965313 1029 + lncRNA gene predicted gene, 42363
Tssr44914 4 154964343 to 154964361 18 - TSS region transcription start site region 44914
Tssr40618 4 154965072 to 154965101 29 + TSS region transcription start site region 40618
Plch2 4 154983115 to 155056784 73669 - protein coding gene phospholipase C, eta 2
Cpgi15454 4 154983761 to 154984304 543 CpG island CpG island 15454
Cpgi15455 4 154986106 to 154986286 180 CpG island CpG island 15455
D4Mit256.2 4 154990377 to 154990489 112 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 256.2
D4Mit256 4 154990439 to 154990571 132 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 256
Tssr44915 4 155011006 to 155011026 20 - TSS region transcription start site region 44915
Tssr44916 4 155019383 to 155019391 8 - TSS region transcription start site region 44916
Tssr44917 4 155019397 to 155019398 1 - TSS region transcription start site region 44917
Tssr44918 4 155019399 to 155019437 38 - TSS region transcription start site region 44918
Gm10564 4 155042046 to 155045422 3376 + antisense lncRNA gene predicted gene 10564
Cpgi15456 4 155042358 to 155043938 1580 CpG island CpG island 15456
Tssr44919 4 155043143 to 155043172 29 - TSS region transcription start site region 44919
D4Mit51 4 155045894 to 155046016 122 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 51
Tssr44920 4 155056784 to 155056827 43 - TSS region transcription start site region 44920
Tssr44921 4 155064013 to 155064045 32 - TSS region transcription start site region 44921
Tssr44922 4 155064046 to 155064066 20 - TSS region transcription start site region 44922
Cpgi15457 4 155066572 to 155067539 967 CpG island CpG island 15457
Tssr40619 4 155067028 to 155067064 36 + TSS region transcription start site region 40619
Pex10 4 155067030 to 155072406 5376 + protein coding gene peroxisomal biogenesis factor 10
Rer1 4 155074109 to 155086381 12272 - protein coding gene retention in endoplasmic reticulum sorting receptor 1
Tssr44923 4 155080836 to 155080879 43 - TSS region transcription start site region 44923
Cpgi15458 4 155085703 to 155087149 1446 CpG island CpG island 15458
Tssr44924 4 155086248 to 155086265 17 - TSS region transcription start site region 44924
Tssr44925 4 155086271 to 155086379 108 - TSS region transcription start site region 44925
Morn1 4 155086577 to 155145505 58928 + protein coding gene MORN repeat containing 1
Tssr40620 4 155086578 to 155086610 32 + TSS region transcription start site region 40620
Cpgi15459 4 155093000 to 155093211 211 CpG island CpG island 15459
Tssr40621 4 155095889 to 155095898 9 + TSS region transcription start site region 40621
Tssr1397 4 155111289 to 155111292 3 + TSS region transcription start site region 1397
Cpgi15460 4 155150219 to 155151570 1351 CpG island CpG island 15460
Ski 4 155154075 to 155222592 68517 - protein coding gene ski sarcoma viral oncogene homolog (avian)
Tssr44926 4 155154425 to 155154438 13 - TSS region transcription start site region 44926
Tssr44927 4 155154789 to 155154843 54 - TSS region transcription start site region 44927
Tssr44928 4 155154879 to 155154953 74 - TSS region transcription start site region 44928
Cpgi15461 4 155157965 to 155158301 336 CpG island CpG island 15461
Tssr44929 4 155197570 to 155197575 5 - TSS region transcription start site region 44929
Tssr44930 4 155200757 to 155200771 14 - TSS region transcription start site region 44930
Cpgi15462 4 155214957 to 155215116 159 CpG island CpG island 15462
Tssr44931 4 155217205 to 155217212 7 - TSS region transcription start site region 44931
Tssr40622 4 155217532 to 155217562 30 + TSS region transcription start site region 40622
Cpgi15463 4 155221445 to 155223903 2458 CpG island CpG island 15463
Tssr40623 4 155221677 to 155221681 4 + TSS region transcription start site region 40623
Tssr44932 4 155223068 to 155223086 18 - TSS region transcription start site region 44932
Tssr44933 4 155223206 to 155223218 12 - TSS region transcription start site region 44933
Tssr44934 4 155223233 to 155223249 16 - TSS region transcription start site region 44934
Gm42364 4 155225440 to 155228645 3205 - lncRNA gene predicted gene, 42364
Tssr40624 4 155234536 to 155234547 11 + TSS region transcription start site region 40624
Tssr40625 4 155235486 to 155235522 36 + TSS region transcription start site region 40625
Gm33187 4 155240265 to 155243884 3619 + lncRNA gene predicted gene, 33187
Tssr40626 4 155246860 to 155246872 12 + TSS region transcription start site region 40626
Cpgi15464 4 155249637 to 155250815 1178 CpG island CpG island 15464
Faap20 4 155249802 to 155256687 6885 + protein coding gene Fanconi anemia core complex associated protein 20
Tssr40627 4 155249960 to 155250010 50 + TSS region transcription start site region 40627
Tssr40628 4 155250088 to 155250123 35 + TSS region transcription start site region 40628
Tssr40629 4 155250189 to 155250201 12 + TSS region transcription start site region 40629
Tssr40630 4 155250283 to 155250294 11 + TSS region transcription start site region 40630
Prkcz 4 155260129 to 155361361 101232 - protein coding gene protein kinase C, zeta
Tssr44935 4 155328646 to 155328690 44 - TSS region transcription start site region 44935
Gm27200 4 155343683 to 155344465 782 + antisense lncRNA gene predicted gene 27200
Cpgi15465 4 155344595 to 155345911 1316 CpG island CpG island 15465
Tssr44936 4 155345491 to 155345494 3 - TSS region transcription start site region 44936
Tssr44937 4 155345640 to 155345649 9 - TSS region transcription start site region 44937
Tssr44938 4 155345678 to 155345689 11 - TSS region transcription start site region 44938
Tssr44939 4 155345696 to 155345799 103 - TSS region transcription start site region 44939
Tssr1398 4 155352714 to 155352715 1 + TSS region transcription start site region 1398
Cpgi15466 4 155360887 to 155362133 1246 CpG island CpG island 15466
Tssr44940 4 155361322 to 155361346 24 - TSS region transcription start site region 44940
Tssr44941 4 155361356 to 155361433 77 - TSS region transcription start site region 44941
Tssr40631 4 155361667 to 155361678 11 + TSS region transcription start site region 40631
Gabrd 4 155384979 to 155398069 13090 - protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit delta
Tssr40632 4 155397039 to 155397051 12 + TSS region transcription start site region 40632
Tssr40633 4 155397055 to 155397069 14 + TSS region transcription start site region 40633
Tssr40634 4 155397083 to 155397090 7 + TSS region transcription start site region 40634
Cpgi15467 4 155397335 to 155398527 1192 CpG island CpG island 15467
Tssr44942 4 155397981 to 155397997 16 - TSS region transcription start site region 44942
Tssr44943 4 155398011 to 155398028 17 - TSS region transcription start site region 44943
Tssr44944 4 155398037 to 155398055 18 - TSS region transcription start site region 44944
Tssr44945 4 155398059 to 155398080 21 - TSS region transcription start site region 44945
Tssr40635 4 155398165 to 155398197 32 + TSS region transcription start site region 40635
5830444B04Rik 4 155400969 to 155421704 20735 - lncRNA gene RIKEN cDNA 5830444B04 gene
Cpgi15468 4 155408983 to 155409723 740 CpG island CpG island 15468
Cfap74 4 155409190 to 155466823 57633 + protein coding gene cilia and flagella associated protein 74
Tssr40636 4 155409201 to 155409266 65 + TSS region transcription start site region 40636
Tssr40637 4 155409270 to 155409280 10 + TSS region transcription start site region 40637
Tssr40638 4 155409286 to 155409289 3 + TSS region transcription start site region 40638
Tssr44946 4 155411313 to 155411318 5 - TSS region transcription start site region 44946
9630009N12Rik 4 155411621 to 155412151 530 unclassified gene RIKEN cDNA 9630009N12 gene
Tssr44947 4 155414766 to 155414778 12 - TSS region transcription start site region 44947
Tssr44948 4 155414781 to 155414804 23 - TSS region transcription start site region 44948
Tssr44949 4 155414879 to 155414884 5 - TSS region transcription start site region 44949
Tssr40639 4 155414922 to 155414951 29 + TSS region transcription start site region 40639
Tssr40640 4 155414977 to 155414986 9 + TSS region transcription start site region 40640
Tssr40641 4 155415011 to 155415018 7 + TSS region transcription start site region 40641
Tssr40642 4 155466594 to 155466604 10 + TSS region transcription start site region 40642
Cpgi15469 4 155469038 to 155469648 610 CpG island CpG island 15469
Tmem52 4 155469114 to 155470858 1744 + protein coding gene transmembrane protein 52
Tssr40643 4 155469123 to 155469142 19 + TSS region transcription start site region 40643
D4Mit59 4 155475972 to 155476079 107 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 59
Cpgi15470 4 155481218 to 155481676 458 CpG island CpG island 15470
Tssr44950 4 155482887 to 155482897 10 - TSS region transcription start site region 44950
Cpgi15471 4 155490596 to 155492639 2043 CpG island CpG island 15471
Tssr40644 4 155491050 to 155491069 19 + TSS region transcription start site region 40644
Tssr44951 4 155491202 to 155491215 13 - TSS region transcription start site region 44951
Tssr44952 4 155491218 to 155491234 16 - TSS region transcription start site region 44952
Tssr40645 4 155491353 to 155491411 58 + TSS region transcription start site region 40645
Gnb1 4 155491361 to 155559269 67908 + protein coding gene guanine nucleotide binding protein (G protein), beta 1
Tssr40646 4 155495214 to 155495226 12 + TSS region transcription start site region 40646
Gm13171 4 155502316 to 155502706 390 - pseudogene predicted gene 13171
Tssr40647 4 155510522 to 155510525 3 + TSS region transcription start site region 40647
Tssr40648 4 155522529 to 155522543 14 + TSS region transcription start site region 40648
Tssr40649 4 155522560 to 155522591 31 + TSS region transcription start site region 40649
Tssr40650 4 155522592 to 155522622 30 + TSS region transcription start site region 40650
Tssr40651 4 155536797 to 155536801 4 + TSS region transcription start site region 40651
Tssr40652 4 155543056 to 155543076 20 + TSS region transcription start site region 40652
Tssr40653 4 155546855 to 155546869 14 + TSS region transcription start site region 40653
Tssr40654 4 155546975 to 155546992 17 + TSS region transcription start site region 40654
Tssr40655 4 155553418 to 155553435 17 + TSS region transcription start site region 40655
Tssr40656 4 155555064 to 155555081 17 + TSS region transcription start site region 40656
Tssr40657 4 155555146 to 155555192 46 + TSS region transcription start site region 40657
Tssr40658 4 155557163 to 155557200 37 + TSS region transcription start site region 40658
Tssr40659 4 155557741 to 155557753 12 + TSS region transcription start site region 40659
Tssr40660 4 155557940 to 155557968 28 + TSS region transcription start site region 40660
Tssr40661 4 155558021 to 155558043 22 + TSS region transcription start site region 40661
Tssr40662 4 155558110 to 155558115 5 + TSS region transcription start site region 40662
Tssr40663 4 155558257 to 155558279 22 + TSS region transcription start site region 40663
Tssr40664 4 155558795 to 155558808 13 + TSS region transcription start site region 40664
Tssr40665 4 155558958 to 155558981 23 + TSS region transcription start site region 40665
Tssr40666 4 155559772 to 155559808 36 + TSS region transcription start site region 40666
Tssr44953 4 155561892 to 155561898 6 - TSS region transcription start site region 44953
Tssr40667 4 155562348 to 155562413 65 + TSS region transcription start site region 40667
Nadk 4 155562392 to 155591001 28609 + protein coding gene NAD kinase
Tssr40668 4 155562414 to 155562425 11 + TSS region transcription start site region 40668
Tssr1399 4 155563264 to 155563274 10 + TSS region transcription start site region 1399
Tssr40669 4 155563307 to 155563321 14 + TSS region transcription start site region 40669
Cpgi15472 4 155563359 to 155564400 1041 CpG island CpG island 15472
Tssr40670 4 155563732 to 155563743 11 + TSS region transcription start site region 40670
Tssr40671 4 155563798 to 155563865 67 + TSS region transcription start site region 40671
Tssr40672 4 155577131 to 155577164 33 + TSS region transcription start site region 40672
Tssr40673 4 155577455 to 155577466 11 + TSS region transcription start site region 40673
Tssr40674 4 155582476 to 155582489 13 + TSS region transcription start site region 40674
Tssr40675 4 155582521 to 155582547 26 + TSS region transcription start site region 40675
Tssr40676 4 155582735 to 155582744 9 + TSS region transcription start site region 40676
Tssr40677 4 155582761 to 155582772 11 + TSS region transcription start site region 40677
Tssr40678 4 155587350 to 155587364 14 + TSS region transcription start site region 40678
Tssr40679 4 155587908 to 155587920 12 + TSS region transcription start site region 40679
Tssr40680 4 155589735 to 155589751 16 + TSS region transcription start site region 40680
B930046K06Rik 4 155599332 to 155601835 2503 unclassified non-coding RNA gene RIKEN cDNA B930046K06 gene
Cpgi15473 4 155601186 to 155602337 1151 CpG island CpG island 15473
Tssr44954 4 155601256 to 155601292 36 - TSS region transcription start site region 44954
Tssr40681 4 155601272 to 155601277 5 + TSS region transcription start site region 40681
Tssr40682 4 155601373 to 155601413 40 + TSS region transcription start site region 40682
Tssr40683 4 155601414 to 155601443 29 + TSS region transcription start site region 40683
Slc35e2 4 155601416 to 155623340 21924 + protein coding gene solute carrier family 35, member E2
Tssr44955 4 155601791 to 155601841 50 - TSS region transcription start site region 44955
Tssr40684 4 155601854 to 155601940 86 + TSS region transcription start site region 40684
Gm16023 4 155608300 to 155624755 16455 - lncRNA gene predicted gene 16023
Tssr40685 4 155609514 to 155609547 33 + TSS region transcription start site region 40685
Gm10563 4 155614413 to 155645408 30995 - protein coding gene predicted gene 10563
Gm16024 4 155616409 to 155616787 378 + antisense lncRNA gene predicted gene 16024
Tssr44956 4 155624285 to 155624321 36 - TSS region transcription start site region 44956
Tssr1400 4 155624354 to 155624367 13 - TSS region transcription start site region 1400
Cpgi15474 4 155624392 to 155625300 908 CpG island CpG island 15474
Tssr40686 4 155624499 to 155624514 15 + TSS region transcription start site region 40686
Tssr44957 4 155624560 to 155624574 14 - TSS region transcription start site region 44957
Tssr44958 4 155624577 to 155624634 57 - TSS region transcription start site region 44958
Tssr44959 4 155624733 to 155624773 40 - TSS region transcription start site region 44959
Cdk11b 4 155624852 to 155649935 25083 + protein coding gene cyclin-dependent kinase 11B
Tssr40687 4 155624853 to 155624929 76 + TSS region transcription start site region 40687
Tssr40688 4 155624931 to 155624940 9 + TSS region transcription start site region 40688
Tssr40689 4 155624967 to 155624977 10 + TSS region transcription start site region 40689
Tssr40690 4 155625197 to 155625216 19 + TSS region transcription start site region 40690
Tssr1401 4 155625230 to 155625240 10 + TSS region transcription start site region 1401
Tssr40691 4 155625522 to 155625555 33 + TSS region transcription start site region 40691
Tssr40692 4 155626808 to 155626825 17 + TSS region transcription start site region 40692
Tssr40693 4 155630521 to 155630533 12 + TSS region transcription start site region 40693
Tssr1402 4 155630548 to 155630559 11 + TSS region transcription start site region 1402
Tssr40694 4 155638511 to 155638523 12 + TSS region transcription start site region 40694
Tssr40695 4 155638543 to 155638555 12 + TSS region transcription start site region 40695
Tssr40696 4 155638558 to 155638574 16 + TSS region transcription start site region 40696
Tssr40697 4 155638578 to 155638591 13 + TSS region transcription start site region 40697
Mmp23 4 155650655 to 155653384 2729 - protein coding gene matrix metallopeptidase 23
Cpgi15475 4 155652172 to 155655602 3430 CpG island CpG island 15475
Tssr44960 4 155653184 to 155653236 52 - TSS region transcription start site region 44960
Mib2 4 155654677 to 155669198 14521 - protein coding gene mindbomb E3 ubiquitin protein ligase 2
Tssr44961 4 155655005 to 155655024 19 - TSS region transcription start site region 44961
Cpgi15476 4 155668584 to 155669644 1060 CpG island CpG island 15476
Tssr44962 4 155669119 to 155669163 44 - TSS region transcription start site region 44962