Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:154191127-154494918

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Megf6 4 154170730 to 154275713 104983 + protein coding gene multiple EGF-like-domains 6
Tssr40581 4 154191133 to 154191145 12 + TSS region transcription start site region 40581
Tssr40582 4 154191318 to 154191336 18 + TSS region transcription start site region 40582
Gm13132 4 154220541 to 154221012 471 + pseudogene predicted gene 13132
Tssr40583 4 154237549 to 154237571 22 + TSS region transcription start site region 40583
Tssr40584 4 154237577 to 154237608 31 + TSS region transcription start site region 40584
Arhgef16 4 154278469 to 154300051 21582 - protein coding gene Rho guanine nucleotide exchange factor (GEF) 16
Tssr44867 4 154289050 to 154289053 3 - TSS region transcription start site region 44867
Cpgi15437 4 154299421 to 154300440 1019 CpG island CpG island 15437
Tssr40585 4 154299638 to 154299650 12 + TSS region transcription start site region 40585
Tssr44868 4 154299851 to 154299919 68 - TSS region transcription start site region 44868
Tssr44869 4 154300007 to 154300028 21 - TSS region transcription start site region 44869
Tssr44870 4 154300029 to 154300079 50 - TSS region transcription start site region 44870
Prdm16 4 154316125 to 154636873 320748 - protein coding gene PR domain containing 16
Tssr44871 4 154316315 to 154316318 3 - TSS region transcription start site region 44871
Cpgi15438 4 154328465 to 154328905 440 CpG island CpG island 15438
Cpgi15439 4 154334629 to 154335318 689 CpG island CpG island 15439
Tssr44872 4 154334760 to 154334763 3 - TSS region transcription start site region 44872
Tssr44873 4 154334783 to 154334795 12 - TSS region transcription start site region 44873
B230104I21Rik 4 154336127 to 154349918 13791 + unclassified gene RIKEN cDNA B230104I21 gene
Tssr44874 4 154359742 to 154359759 17 - TSS region transcription start site region 44874
Tssr44875 4 154361344 to 154361347 3 - TSS region transcription start site region 44875
D4Mit209 4 154415509 to 154415630 121 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 209
Cpgi15440 4 154438395 to 154438933 538 CpG island CpG island 15440
Cpgi15441 4 154464526 to 154464709 183 CpG island CpG island 15441
Tssr44876 4 154471278 to 154471310 32 - TSS region transcription start site region 44876