Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:154022215-154142260

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smim1 4 154020470 to 154026044 5574 - protein coding gene small integral membrane protein 1
Tssr44852 4 154023765 to 154023777 12 - TSS region transcription start site region 44852
Tssr44853 4 154023787 to 154023798 11 - TSS region transcription start site region 44853
Tssr44854 4 154025623 to 154025634 11 - TSS region transcription start site region 44854
Tssr44855 4 154025657 to 154025686 29 - TSS region transcription start site region 44855
Cpgi15428 4 154025793 to 154026122 329 CpG island CpG island 15428
Tssr44856 4 154025906 to 154025919 13 - TSS region transcription start site region 44856
Tssr44857 4 154025926 to 154025992 66 - TSS region transcription start site region 44857
Tssr40573 4 154026022 to 154026059 37 + TSS region transcription start site region 40573
Tssr44858 4 154026060 to 154026092 32 - TSS region transcription start site region 44858
Tssr40574 4 154026194 to 154026212 18 + TSS region transcription start site region 40574
Gm31672 4 154026221 to 154056559 30338 + lncRNA gene predicted gene, 31672
Ccdc27 4 154026644 to 154042677 16033 - protein coding gene coiled-coil domain containing 27
Tssr44859 4 154042660 to 154042714 54 - TSS region transcription start site region 44859
Gm13117 4 154043733 to 154044423 690 - pseudogene predicted gene 13117
Gm13114 4 154048023 to 154048128 105 - pseudogene predicted gene 13114
Trp73 4 154056253 to 154140208 83955 - protein coding gene transformation related protein 73
Cpgi15429 4 154071565 to 154071819 254 CpG island CpG island 15429
Cpgi15430 4 154081257 to 154081619 362 CpG island CpG island 15430
Tssr44860 4 154081546 to 154081586 40 - TSS region transcription start site region 44860
Tssr44861 4 154082025 to 154082030 5 - TSS region transcription start site region 44861
Tssr44862 4 154082099 to 154082115 16 - TSS region transcription start site region 44862
Tssr40575 4 154082215 to 154082260 45 + TSS region transcription start site region 40575
4930533B18Rik 4 154088062 to 154088920 858 unclassified gene RIKEN cDNA 4930533B18 gene
Trp73os 4 154093479 to 154098353 4874 + antisense lncRNA gene transformation related protein 73, opposite strand
D4Mit344 4 154094054 to 154094240 186 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 344
Tssr44863 4 154097105 to 154097114 9 - TSS region transcription start site region 44863
Cpgi15431 4 154105389 to 154105745 356 CpG island CpG island 15431
Cpgi15432 4 154109634 to 154109835 201 CpG island CpG island 15432
Gm26036 4 154134030 to 154134173 143 + snoRNA gene predicted gene, 26036
Cpgi15433 4 154139369 to 154141882 2513 CpG island CpG island 15433
Tssr44864 4 154139871 to 154139879 8 - TSS region transcription start site region 44864
Cpgi15434 4 154142178 to 154142892 714 CpG island CpG island 15434