Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:152357748-152998003

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chd5 4 152338651 to 152390194 51543 + protein coding gene chromodomain helicase DNA binding protein 5
Cpgi15413 4 152360493 to 152361277 784 CpG island CpG island 15413
Tssr44835 4 152361017 to 152361025 8 - TSS region transcription start site region 44835
Kcnab2 4 152390740 to 152477549 86809 - protein coding gene potassium voltage-gated channel, shaker-related subfamily, beta member 2
Gm16333 4 152410800 to 152411262 462 + antisense lncRNA gene predicted gene 16333
Gm16334 4 152418283 to 152421834 3551 - unclassified non-coding RNA gene predicted gene 16334
Tssr44836 4 152418750 to 152418761 11 - TSS region transcription start site region 44836
Tssr44837 4 152418798 to 152418810 12 - TSS region transcription start site region 44837
D4Mit356 4 152429969 to 152430092 123 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 356
Cpgi15414 4 152448303 to 152448472 169 CpG island CpG island 15414
Tssr44838 4 152448732 to 152448750 18 - TSS region transcription start site region 44838
Tssr44839 4 152448767 to 152448789 22 - TSS region transcription start site region 44839
Tssr44840 4 152448808 to 152448848 40 - TSS region transcription start site region 44840
Cpgi15415 4 152476590 to 152478480 1890 CpG island CpG island 15415
Nphp4 4 152476706 to 152563183 86477 + protein coding gene nephronophthisis 4 (juvenile) homolog (human)
Tssr44841 4 152477462 to 152477549 87 - TSS region transcription start site region 44841
Tssr40557 4 152477732 to 152477766 34 + TSS region transcription start site region 40557
Tssr40558 4 152478176 to 152478183 7 + TSS region transcription start site region 40558
Tssr40559 4 152488305 to 152488332 27 + TSS region transcription start site region 40559
Cpgi15416 4 152558367 to 152558551 184 CpG island CpG island 15416
Gm30734 4 152580818 to 152583635 2817 - lncRNA gene predicted gene, 30734
Cpgi15417 4 152646968 to 152647236 268 CpG island CpG island 15417
Cpgi15418 4 152667132 to 152667316 184 CpG island CpG island 15418
Gm13172 4 152677748 to 152678003 255 - pseudogene predicted gene 13172
Gm833 4 152697540 to 152700515 2975 + lincRNA gene predicted gene 833
Gm30851 4 152762770 to 152772326 9556 + lncRNA gene predicted gene, 30851
Cpgi15419 4 152779647 to 152779954 307 CpG island CpG island 15419
Gm30911 4 152851543 to 152859293 7750 - lncRNA gene predicted gene, 30911